Protein Info for QEN71_RS00030 in Paraburkholderia sabiae LMG 24235

Annotation: ethanolamine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 467 transmembrane" amino acids 24 to 43 (20 residues), see Phobius details amino acids 50 to 73 (24 residues), see Phobius details amino acids 100 to 125 (26 residues), see Phobius details amino acids 137 to 158 (22 residues), see Phobius details amino acids 163 to 183 (21 residues), see Phobius details amino acids 204 to 227 (24 residues), see Phobius details amino acids 239 to 261 (23 residues), see Phobius details amino acids 290 to 312 (23 residues), see Phobius details amino acids 339 to 356 (18 residues), see Phobius details amino acids 368 to 391 (24 residues), see Phobius details amino acids 404 to 423 (20 residues), see Phobius details amino acids 428 to 450 (23 residues), see Phobius details TIGR00908: ethanolamine permease" amino acids 15 to 462 (448 residues), 710.6 bits, see alignment E=4e-218 PF13520: AA_permease_2" amino acids 22 to 428 (407 residues), 138.7 bits, see alignment E=2.9e-44 PF00324: AA_permease" amino acids 31 to 434 (404 residues), 123.9 bits, see alignment E=7.9e-40

Best Hits

KEGG orthology group: None (inferred from 97% identity to bph:Bphy_0006)

Predicted SEED Role

"Ethanolamine permease" in subsystem Ethanolamine utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (467 amino acids)

>QEN71_RS00030 ethanolamine permease (Paraburkholderia sabiae LMG 24235)
MKQESTTQHHGTVTHHELKQTLGTWQLWGIAVGLVISGEYFGWSYGWASAGTLGFVITAL
FIAAMYTTFIFSFTELTTSIPHAGGPFAYARHAFGPTGGYIAGAATLVEFVFAPPAIALA
IGAYLHVQFPGLEPKHAAMGAYLVFMALNIVGVQIAAAFELCVTLLAIFELLVFMGVVSP
GFQWSNFTKGGWSGSDSFSMGSFHGMFAAIPFAIWFFLAIEGVAMAAEEAKNPKRSIPIA
YVTGILTLVVLAIGVMLFAGAAGDWTKLANINDPLPQAMKYIVGENSGWMHMLVWLGLFG
LVASFHGIILGYSRQIFALARAGYLPEFLSKVHPRFKTPHRAILAGGVVGIAAIYSDELI
QFGGQTLTANIVTMSVFGAIVMYIISMLALFKLRRIEPDMERPFRAPLFPYFPAFALVAA
VISLATMIYFNLLVALVFAAFVALGYGYFLMTRHQREVAPADVLLEE