Protein Info for Psyr_2591 in Pseudomonas syringae pv. syringae B728a ΔmexB

Annotation: transport system permease protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 329 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 59 to 78 (20 residues), see Phobius details amino acids 88 to 108 (21 residues), see Phobius details amino acids 114 to 134 (21 residues), see Phobius details amino acids 146 to 167 (22 residues), see Phobius details amino acids 190 to 210 (21 residues), see Phobius details amino acids 234 to 261 (28 residues), see Phobius details amino acids 275 to 295 (21 residues), see Phobius details amino acids 304 to 323 (20 residues), see Phobius details PF01032: FecCD" amino acids 13 to 324 (312 residues), 296.7 bits, see alignment E=9.4e-93

Best Hits

Swiss-Prot: 69% identical to CBRB_DICD3: Achromobactin transport system permease protein CbrB (cbrB) from Dickeya dadantii (strain 3937)

KEGG orthology group: K02015, iron complex transport system permease protein (inferred from 100% identity to psb:Psyr_2591)

MetaCyc: 46% identical to ferric enterobactin ABC transporter membrane subunit FebD (Escherichia coli K-12 substr. MG1655)
ABC-10-RXN [EC: 7.2.2.17]

Predicted SEED Role

"Siderophore achromobactin ABC transporter, permease protein"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.2.2.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZT92 at UniProt or InterPro

Protein Sequence (329 amino acids)

>Psyr_2591 transport system permease protein (Pseudomonas syringae pv. syringae B728a ΔmexB)
MTAAAKLGLGLLILVACMGLSLATGATWISPADIVRSVWQPDALSAIEHVLLDTRLTRTL
MAVAVGSSLAVAGALMQALTRNPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAF
IGAAVAGTIVWVIGNRGQGSLNPLRIVLAGAAITALFTAFSQALLVVNQDGLDTVLFWLA
GSLSERELSTAAPLLVCVVMGLAGALVLAGQVNVLNTGEAIATALGQRTGLIRLMMSVVI
IALAGSAVALAGSIGFIGLLVPHMVRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIV
PQEVPVGVMTALFGAPFFIALVRRGTRYG