Protein Info for Psyr_2589 in Pseudomonas syringae pv. syringae B728a ΔmexB

Annotation: IucA/IucC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 627 PF04183: IucA_IucC" amino acids 166 to 409 (244 residues), 184.6 bits, see alignment E=2.3e-58 PF06276: FhuF" amino acids 455 to 601 (147 residues), 60 bits, see alignment E=4.1e-20

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_2589)

MetaCyc: 68% identical to achromobactin synthetase protein A (Pseudomonas syringae pv. syringae B728a)
6.3.2.-; 6.3.2.-; 6.3.2.-; 6.3.2.-

Predicted SEED Role

"Achromobactin biosynthesis protein AcsA @ Siderophore synthetase superfamily, group B"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZT94 at UniProt or InterPro

Protein Sequence (627 amino acids)

>Psyr_2589 IucA/IucC (Pseudomonas syringae pv. syringae B728a ΔmexB)
MNFTSLAADLVMQDLVDCLLAEDFFGREPLRLQDSSQWQLRHPQAPQLVDQGSAQQIWEW
CCDDSEQRFISIALRAGITQQWEKVPGTPVLGRQDERWTQLSPEDFMKWVFAGKATLLQD
SERQDNEKGIALFLEVLRISVWQTALSLDHKVDEQNLMAQDGATFFRTMEQWASLRDRPY
HPLAKAKQGLNEQEYLQYQAEFARPVALNWVAVDKTLLQCGDGVEDLNASFPARYLLPEN
LQAQLDQEMQARGIAGSHVALPVHPWQFEHVLQVQLGDAFAKGDCQRLDFNQAQVHATSS
LRSMTPCFNSADYLKLPMAIYSLGASRYLPAVKMINGGLSEKLLRQVVDKDETLSRSLHL
CDERKWWAFMPPQATLFDEGPRHLSAMVRGYPAALLDDPECRLLPMAALGTPLPGSNRHF
FDEWMDYRELPRNQASVLTLFRELSHSFFDINLRMFRLGMLGEVHGQNAVMVWKAGQAQG
LLLRDHDSLRIFVPWLERNGMHDPEYRIKKGHANTLYHDRPEDLLFWLQTLGIQVNVRAI
MDTLAQVYDVPVTALWTVLRDVLDNLITTIEFDDEARGMIRQQLFEAPNWPQKLLLTPMI
ERAGGPGSMPFGKGEVVNPFHRLRRAT