Protein Info for Psyr_1188 in Pseudomonas syringae pv. syringae B728a ΔmexB

Annotation: type III effector protein AvrE1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1786 PF11725: AvrE_T3Es" amino acids 250 to 1778 (1529 residues), 1564.4 bits, see alignment E=0

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_1188)

Predicted SEED Role

"Type III effector protein AvrE1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZX80 at UniProt or InterPro

Protein Sequence (1786 amino acids)

>Psyr_1188 type III effector protein AvrE1 (Pseudomonas syringae pv. syringae B728a ΔmexB)
MQAPTVNRNTGNVIAPEATARADNPSNIRQQTEQPTQRSSHSLGSMGKRLLKSVGKVFQK
SRAPRQSAARPPSTQPPSSSPPRSSREAGRNTSRDTRLPDNPPPRNDPPPKSILRTRANT
SGTTKHEIEQGSTRADTAPRNNRRVTFNLPQDQLTRSASEQLAAEPMTDEEAVASAMRER
RNPGGRLQGPDGTRQSMQPVDPNTASSSGTQADDPDGPLARRNTGLESSTGGSSELRSEQ
LIRDTRPQATIRLSADGKPDFSSFKTPGMAALLNDILAKPGQTYLAQQSEQGVQDHQLLQ
ANGHLLHLAQGDSSLAVIRSSEPTLPVAGGKPPPVNMQREENHIHLDTLDGRRSQELPGK
AHIAHLTDVHQTTNGDRLRVHEDRLYQFEPLAARWKPVDEIEDIAFNRLITGGNGSVYAK
SDDVVVDLSSPFMPHADFNDLKSFSVAPDDTAALLSGSDVQTVLLTDMSPVIGGLTPKKT
KTLELDGGQAQAAEVALSNDRLFIADTQGRLYSTDRSAFESNEPTLRLMPERAGYRLDDQ
PMGGHNSVSGFISGDDGRVHALIRNRQGEVHSHALDEQGAKLESGWNLTNALVLDNTRGL
TVMPAPVGADRLHLDRAGLVGLNAGRIQRWDATPQCWKDAGIKDVDRLQRGADSNAYVLK
GGKLLRLDVAPKHPNVAFDHNTALAQIARSTKVAMGKEIAGLENRVVTAFAMVSDKRFVA
LDDQNRLTAHSKDHKPIDLDTSAIDGDIKDLALDEKHNLYTLSSTGKLYCMPREAWQATR
FGGQLAAKWTPLAAPDGQPVKALYSNDDNRLSVQVEDAAGQGLMQLKEGQWQAFEQRPVE
KNGLNDVYNRITRAHKTWRIPGTGLTANLDINAFGRSGMEKSNRPTASEAIRANVYKHTL
EPPRWMKNVGNNIQHRYHGREGLKELYKKELIAFKQLELVHEAAGAPPTPGNDLKARIAR
LQLGPEGAELAKELEVFRDELEKHARTALENIGKDYGKLKNLKQNDGVLNQHSALAKPSK
RTQLGKKLAELGSILNFKSSGHDFVKELDDALTRIAPSAENPTARTLKLLKDNGVKLSHT
KTDIGLGQRRDANEDHGLSKARLALDLVTLNDLGALIGKVELLARSSDLPRLQAELTSLR
DVTYGENPVKQVTDMGFTDNAALEGAYDAVKAFSNALKKSDHAVSVNMRAATGSQNQSEL
ADTLKAMLKNLEHGDDEIGVQRSYGLNLTSPWVVLADKSTGPWPNAGATGNRNYLFSAER
CEGGVTLYLTREAAGNVNGGVGGGKDYWPGFFDENHPARSVDIGNNRKMTPNFRLGADVT
ATAAASQRAGVIFNVADDEIDGFVDDLFEGKLNPLQLLNKVKDHETYEARRFNFDITTGF
SADMRVGFGLSEADSAPLSAVARLGVAANVTVNLLSYTDYSLTQKNDKTELRDGGKNRPR
FFNSLIFGGQARGQISGTHSNSTATPTSAAGPTPATQSAANNLGVAANVTIDDKTVKRVK
FRFNVATPMTTESLDKLSKSLGAAFKDKATTARLAELQNPLNALYVDMNPEQAIQARLDG
LKALFAERPSQNDTQYKALRDLKRAGVQHEASINNHSVLDNARFETSKTSLSGLSKESIL
TRIMGSLRDASAPGNAARVAEYMRQDPTLSAMVKQLENSQGTLARIRLEPKDSLIDEIDE
GSRRGTLTQTELSGLLENRNNMRIKRLVVFHTPRQTENFTSPTPLISYNSGASLSVNKPL
GRINFIYGEDQDKPIGYTFDGELSRPSASLKEAAGELKLSGFEVKS