Protein Info for Psyr_0465 in Pseudomonas syringae pv. syringae B728a ΔmexB

Annotation: HopAN1 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 429 PF07005: SBD_N" amino acids 10 to 236 (227 residues), 264.5 bits, see alignment E=9.4e-83 PF17042: NBD_C" amino acids 263 to 418 (156 residues), 147.5 bits, see alignment E=5.7e-47

Best Hits

Swiss-Prot: 98% identical to OTNK_PSE14: 3-oxo-tetronate kinase (otnK) from Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6)

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_0465)

MetaCyc: 72% identical to 3-dehydrotetronate 4-kinase monomer (Cupriavidus necator H16)
RXN-18594 [EC: 2.7.1.217]; 2.7.1.217 [EC: 2.7.1.217]

Predicted SEED Role

"FIG00641944: hypothetical protein"

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.1.217

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZZ87 at UniProt or InterPro

Protein Sequence (429 amino acids)

>Psyr_0465 HopAN1 protein (Pseudomonas syringae pv. syringae B728a ΔmexB)
MSLNNARPLLGCIADDFTGATDLANMLVRGGMRTVQSIGIPSAEMAAGLDADAIVIALKS
RTTPSAEAVAESLAALEWLRERGCEQIFFKYCSTFDSTAAGNIGQVSEALLEQLGSDFTL
ACPAFPENGRTIFRGHLFVQDQLLSESGMQNHPLTPMTDANLVRVLQAQTSHKVGLLRYD
SIAQGVEGVRNRIAELRAEGVSMAIADALSDADLYTLGEACADLPLLTGGSGLALGLPGN
FRKAGKLRDIDAAKQVAISGGEVVLAGSASVATNGQVAAWLEADRPALRINPLELAAGKP
VVEQALAFARDAGQTVLIYATSTPDEVKAVQQELGVERSGAMVEAALGEIAKGLLDAGVR
RFVVAGGETSGAVVQALGVQLLQIGAQIDPGVPATVSSGAQPLALALKSGNFGARDFFAK
ALKQLAGAA