Protein Info for PfGW456L13_754 in Pseudomonas fluorescens GW456-L13

Annotation: Phosphate transport system permease protein PstC (TC 3.A.1.7.1)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 760 transmembrane" amino acids 40 to 64 (25 residues), see Phobius details amino acids 464 to 486 (23 residues), see Phobius details amino acids 499 to 522 (24 residues), see Phobius details amino acids 528 to 548 (21 residues), see Phobius details amino acids 564 to 584 (21 residues), see Phobius details amino acids 611 to 630 (20 residues), see Phobius details amino acids 659 to 680 (22 residues), see Phobius details amino acids 725 to 746 (22 residues), see Phobius details PF00528: BPD_transp_1" amino acids 508 to 755 (248 residues), 27.4 bits, see alignment E=1.3e-10

Best Hits

KEGG orthology group: K02037, phosphate transport system permease protein (inferred from 96% identity to pfo:Pfl01_5614)

Predicted SEED Role

"Phosphate transport system permease protein PstC (TC 3.A.1.7.1)" in subsystem High affinity phosphate transporter and control of PHO regulon or Phosphate metabolism (TC 3.A.1.7.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QFC1 at UniProt or InterPro

Protein Sequence (760 amino acids)

>PfGW456L13_754 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) (Pseudomonas fluorescens GW456-L13)
MNDLANSNMTTNPPKRIDFNTPELQRKRRIRALKDRFTRWYVLIGGLAVLAAITLIFFFL
AYVVAPLFQGADLTAKESITPAWMQDAGKPLMISLEEQNQVAMRVSDKGQALFFDIDSGA
ELKRVDLSIPAGTTVTSIGEDQPGHPLVAVGLSNGQALVFRHTYKVSYPEGKKTITPAVE
YPYGETPIAVNEAGGALEHVSLNANDSTLMLVGSTGSQLNVLSLTSEENMMTGEVTNEQK
RIELPQMTEPVKNIFVDPRQQWLYVVNGRAQADVFSLRDKSLNGRYKLLEDGEAQVTAST
QLVGGISLIIGDSKGGLAQWFMARDPDGEQRLKQIRTFQMGTTPIVEITAEERRKGFVAL
DASGKLGVFHSTAHRTLLVEPVAEGQGVFGLSPRANRVIVEAGGKLHPLLLDNPHPEVSW
SALWSKVWYENYDEPKYVWQSTAANTDFEPKLSLSPLTFGTLKAAFYAMLLAAPLAVAAA
IYTAYFMAPGMRRKVKPVIELMEAMPTVILGFFAGLFLAPYVEGHLPGIFSLLMLLPIGI
LVAGFTFSRLPESIRLKVPDGWESALLIPVILFVGWLSLYMSPFMENWFFGGDMRMWISH
DLGITYDQRNALVVGLAMGFAVIPNIYSIAEDAVFSVPRGLTLGSLALGATPWQTMTRVV
ILTASPGIFSALMIGMGRAVGETMIVLMATGNTPVMEMNLFEGLRTLAANVAVEMPESEV
GGSHYRVLFLSALVLLLFTFVMNTLAELIRQRLRKKYSSL