Protein Info for PfGW456L13_4182 in Pseudomonas fluorescens GW456-L13

Annotation: Allantoicase (EC 3.5.3.4)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• TIGR02961: allantoicase
  • amino acids 11 to 328 (318 residues), 473 bits, E=1.7e-146
• PF03561: Allantoicase
  • amino acids 20 to 165 (146 residues), 170.6 bits, E=1.1e-54
  • amino acids 187 to 329 (143 residues), 167.1 bits, E=1.3e-53

Best Hits

Swiss-Prot: 95% identical to ALLC_PSEFS: Probable allantoicase (alc) from Pseudomonas fluorescens (strain SBW25)

KEGG orthology group: K01477, allantoicase [EC: 3.5.3.4] (inferred from 96% identity to pba:PSEBR_a4186)

Predicted SEED Role

"Allantoicase (EC 3.5.3.4)" in subsystem Allantoin Utilization (EC 3.5.3.4)

MetaCyc Pathways

• superpathway of purines degradation in plants (14/18 steps found)
• allantoin degradation to glyoxylate I (2/3 steps found)
• superpathway of allantoin degradation in yeast (4/6 steps found)
• allantoin degradation to ureidoglycolate I (urea producing) (1/2 steps found)
• superpathway of allantoin degradation in plants (4/8 steps found)

KEGG Metabolic Maps

• Purine metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.5.3.4

Sequence Analysis Tools

See A0A293QTK1 at UniProt or InterPro

Protein Sequence (331 amino acids)

>PfGW456L13_4182 Allantoicase (EC 3.5.3.4) (Pseudomonas fluorescens GW456-L13)
MKAYAVPFEKFVNLADARLGTKIISVTDDWFADANRLFQPTPAVWKEGVFDDNGKWMDGW
ESRRKRFEGFDSAVIRLGVPGSIKGVDIDTSFFTGNFPPSASLEACFLTEGEPNENTQWV
EVLSAVELQGNSHHYHEINNDQAFSHLRFNIYPDGGVARLRVYGVPFRDWSATGDNEQVD
LAAALNGGRALACSDEHFGRMSNILNPGRGINMGDGWETARRRTPGNDWVIVALGHAGEV
EKVIVDTLHFKGNYPDSCSIQGAFVKGGTDSQIETQSLFWRELLPSQKLEMHAEHTFAEQ
IKALGPITHIRLNVFPDGGVSRLRVLGKVAK