Protein Info for PfGW456L13_3115 in Pseudomonas fluorescens GW456-L13

Annotation: Cytosine/purine/uracil/thiamine/allantoin permease family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 476 transmembrane" amino acids 38 to 62 (25 residues), see Phobius details amino acids 68 to 88 (21 residues), see Phobius details amino acids 109 to 132 (24 residues), see Phobius details amino acids 152 to 171 (20 residues), see Phobius details amino acids 181 to 199 (19 residues), see Phobius details amino acids 216 to 236 (21 residues), see Phobius details amino acids 256 to 278 (23 residues), see Phobius details amino acids 286 to 319 (34 residues), see Phobius details amino acids 331 to 349 (19 residues), see Phobius details amino acids 361 to 383 (23 residues), see Phobius details amino acids 405 to 424 (20 residues), see Phobius details amino acids 435 to 460 (26 residues), see Phobius details PF02133: Transp_cyt_pur" amino acids 24 to 449 (426 residues), 176.4 bits, see alignment E=4.7e-56

Best Hits

KEGG orthology group: None (inferred from 69% identity to rlg:Rleg_5706)

Predicted SEED Role

"Cytosine/purine/uracil/thiamine/allantoin permease family protein" in subsystem Purine Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QRV6 at UniProt or InterPro

Protein Sequence (476 amino acids)

>PfGW456L13_3115 Cytosine/purine/uracil/thiamine/allantoin permease family protein (Pseudomonas fluorescens GW456-L13)
MSTRRNSEKSVINEANYDALGIEPVPDSHRTSTPLDQFWIWAGANVAPINWVLGAIGIQL
GLSLWETLLVIVVGNLLGAALFGGICIMGHRTGVPQMVLSRLAFGRRGAYLPTIMQVLMP
MGWVATNTWIVLDLAVAALEKIGISGGMELKYGIALAVMILQVGIAAWGFNAIKCFERYT
MPVILLIMVVMTVLAFTHVDIQWQASTTEGFGKLSAMSSLMTAIGIGWGISWLVYASDYT
RFTQSKLSDGQVFRSTFLGMFLPTVWLAFLGATIASAGGGSDPAQLIIAVFGTMALPVLL
VLLHGPVATNIVVIYSAALATLSLDLRVPRWAVSMVSGVVALFMLYLFLQSGEFVHAFEN
LMVFFVVWISPWAGITLVDFFLIRRGQVDLKSLYCHHSQSACADVNWRGIFALAVGILAA
WLFQVGTIKSLQGPLAMALGGIDLSWLAGFGVGGGIYYLLHRSRRTEVVSSSVLAK