Protein Info for PfGW456L13_2678 in Pseudomonas fluorescens GW456-L13

Annotation: Exoenzymes regulatory protein AepA precursor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 611 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF07969: Amidohydro_3" amino acids 68 to 587 (520 residues), 248.6 bits, see alignment E=2.1e-77 PF01979: Amidohydro_1" amino acids 518 to 587 (70 residues), 33.5 bits, see alignment E=2.9e-12

Best Hits

KEGG orthology group: None (inferred from 46% identity to aba:Acid345_4740)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293Q0F0 at UniProt or InterPro

Protein Sequence (611 amino acids)

>PfGW456L13_2678 Exoenzymes regulatory protein AepA precursor (Pseudomonas fluorescens GW456-L13)
LFIAVASTTAFSCVALGAAPADTVMRNGYVYTVDGQNSVQQAIAISGGKIVYVGSDAGVD
GYIGKQTQLIDLAGRMLMPGFVDAHMHPGDGGRAMTLCDLKYQTMTRAQFQASIQACLDA
EKDKGPDVWLEVGSWDRMGMTGLDGDADKSTLDALKTQRPIQVRSTDFHTVLTNSRGLEL
AGINKNTADPEDGKYRRDSAGNPNGICEDGAAESLAAVVPPATDAEKLNQMRAALDAMRQ
QGITSFFDALAGPENGKAFTRLQQSGELTARALLAIKLDPAAAAADPVKTIAEAKALAST
YDQGDVKVAPGVSMRHVKLFLDGIINAPADTGAMLTPYLHNSGTDKAPQWTPGKNLGELY
FPPQVLNPLVLQAVKAGLDPHLHATGERAVRDALDSVAYVRQQLPGQDFRPAIAHAESVD
PADYARFKALDVTATMSFQWAQQAPSTVDGTSDHLGAARFARMEPSGSIAHAGGRVAFGS
DWPVDPLDEFLALKVGVTRSGDPSNPHSYGPKYAGRLNADPALSRAEVLRSITLSSAEQL
KLDAVLGSVEVGKFADLIVLDKNFMQVPEEELGRNDVLLTLVGGKVVWAKAPFLGLAPQV
VSQVVTSRSVQ