Protein Info for PfGW456L13_2351 in Pseudomonas fluorescens GW456-L13

Annotation: Permeases of the major facilitator superfamily

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 436 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 49 to 74 (26 residues), see Phobius details amino acids 86 to 106 (21 residues), see Phobius details amino acids 113 to 138 (26 residues), see Phobius details amino acids 150 to 172 (23 residues), see Phobius details amino acids 186 to 207 (22 residues), see Phobius details amino acids 242 to 265 (24 residues), see Phobius details amino acids 277 to 298 (22 residues), see Phobius details amino acids 308 to 328 (21 residues), see Phobius details amino acids 334 to 357 (24 residues), see Phobius details amino acids 369 to 393 (25 residues), see Phobius details amino acids 400 to 422 (23 residues), see Phobius details PF00083: Sugar_tr" amino acids 15 to 223 (209 residues), 89.8 bits, see alignment E=1.9e-29 PF07690: MFS_1" amino acids 17 to 281 (265 residues), 67.1 bits, see alignment E=1.4e-22

Best Hits

KEGG orthology group: None (inferred from 94% identity to pfo:Pfl01_3897)

Predicted SEED Role

"Permeases of the major facilitator superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QPD6 at UniProt or InterPro

Protein Sequence (436 amino acids)

>PfGW456L13_2351 Permeases of the major facilitator superfamily (Pseudomonas fluorescens GW456-L13)
MKPQASSQPRRAAAAAFIGTMIEWYDFYIYATAAALVFGALFFPSDDKLFSTMAAFGTFA
VGFFARPLGGIVFGHIGDRIGRKKSLIITLLMMGVVTVCIGLLPTYAQIGAAAPVLLILL
RIVQGIAVGGEWGGAVLMAGEHAPKGRRNFFASFAQLGSPAGLILSLLAFSAVTRLPEED
LMSWGWRLPFLASSLLLLVGLAIRLGVNESPEFLASRELASKNKRKEQAPVMEVLRTAWR
PLLLCIGANTLGIAGVYFTNTFMIAYTTQQLELPRSLILECLFVVAIIQFCIQPLAAWVA
EKIGATRFLCLVSLLAMASPYPMFVLVSSAQAPLIILGIALAVVCMASFYAVIAGYVSGM
FETRVRYTAISLAYQICGAVAGGLTPLIGTLLAHRFVGQWWPMAVFYSLIAATSLLCVLS
LARRHASAERLELAKA