Protein Info for PP_5503 in Pseudomonas putida KT2440

Annotation: putative CheA signal transduction histidine kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: None (inferred from 94% identity to ppf:Pput_3613)

Predicted SEED Role

"FIG00953472: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A140FW59 at UniProt or InterPro

Protein Sequence (170 amino acids)

>PP_5503 putative CheA signal transduction histidine kinase (Pseudomonas putida KT2440)
MMDTALSFDDALQGFLLDAQVLLTQAQECLQHLELIDNDPDACSCLNNTLDTIARQATRL
GLREVAHYTTSLQQLLAPACHGGCLQREALPAIGACLTLLAWQLELVDSRTGRLNLDIGE
QLVLLGELAKVVQPPFAPACASCDEEGNACIHPHNDAATSALPNRSNRMH