Protein Info for PP_2843 in Pseudomonas putida KT2440

Annotation: urease subunit gamma

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00547: Urease_gamma
  • amino acids 1 to 99 (99 residues), 162.8 bits, E=1.1e-52
• TIGR00193: urease, gamma subunit
  • amino acids 1 to 99 (99 residues), 165.5 bits, E=1.5e-53

Best Hits

Swiss-Prot: 100% identical to URE3_PSEP1: Urease subunit gamma (ureA) from Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)

KEGG orthology group: K01430, urease subunit gamma [EC: 3.5.1.5] (inferred from 100% identity to ppg:PputGB1_2937)

MetaCyc: 75% identical to urease gamma subunit (Sinorhizobium meliloti Rm2011)
Urease. [EC: 3.5.1.5]

Predicted SEED Role

"Urease gamma subunit (EC 3.5.1.5)" in subsystem Urea decomposition (EC 3.5.1.5)

MetaCyc Pathways

• urea degradation II (1/1 steps found)
• superpathway of allantoin degradation in plants (3/8 steps found)

KEGG Metabolic Maps

• Arginine and proline metabolism
• Atrazine degradation
• Purine metabolism
• Urea cycle and metabolism of amino groups

Isozymes

Compare fitness of predicted isozymes for: 3.5.1.5

Use Curated BLAST to search for 3.5.1.5

Sequence Analysis Tools

See Q88J06 at UniProt or InterPro

Protein Sequence (100 amino acids)

>PP_2843 urease subunit gamma (Pseudomonas putida KT2440)
MELTPREKDKLLLFTAALLAERRLARGLKLNYPEAVALISAAVLEGARDGRTVAELMSLG
REVLTREQVMPGIAEMLHDVQVEATFPDGTKLVTVHDPIV