Protein Info for PP_2584 in Pseudomonas putida KT2440
Annotation: hydroxydechloroatrazine ethylaminohydrolase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 44% identical to OXODE_PSEAE: 8-oxoguanine deaminase (PA0142) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
KEGG orthology group: K03382, hydroxyatrazine ethylaminohydrolase [EC: 3.5.99.3] (inferred from 100% identity to ppf:Pput_3132)MetaCyc: 44% identical to 8-oxoguanine deaminase monomer (Pseudomonas aeruginosa)
RXN-11455 [EC: 3.5.4.32]
Predicted SEED Role
"Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3)" (EC 3.5.4.3, EC 3.5.99.3)
MetaCyc Pathways
- purine nucleotides degradation II (aerobic) (11/11 steps found)
- purine nucleotides degradation I (plants) (10/12 steps found)
- guanosine nucleotides degradation II (4/4 steps found)
- guanosine nucleotides degradation III (4/4 steps found)
- superpathway of guanosine nucleotides degradation (plants) (5/6 steps found)
- superpathway of purines degradation in plants (13/18 steps found)
- drosopterin and aurodrosopterin biosynthesis (5/7 steps found)
- purine nucleobases degradation II (anaerobic) (16/24 steps found)
- purine nucleobases degradation I (anaerobic) (6/15 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 3.5.4.3, 3.5.99.3
Use Curated BLAST to search for 3.5.4.3 or 3.5.4.32 or 3.5.99.3
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q88JR5 at UniProt or InterPro
Protein Sequence (457 amino acids)
>PP_2584 hydroxydechloroatrazine ethylaminohydrolase (Pseudomonas putida KT2440) MSSTNPAKTLLVKNAALLVTMDGERREIKNGGLFIEGNLIKQVGPSETLPQHADVVLDMA GKVVIPGLVNTHHHMYQSLTRVVPAAQDGELFNWLTNLYPIWARLTPEMIAVSTQTAMAE LILSGCTTSSDHLYIYPNGCKLDDSIHAAAEIGMRFHAARGSMSVGQSQGGLPPDSVVEK EADILKESQRLIEDYHDASHGSMRRIVVAPCSPFSVSRDLMREAAVLARQYGVSLHTHLA ENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDQHGIELFARTGTGVAHCPCS NMRLASGIAPVRKMRDHGVPVGLGVDGSASNDGASMIGEVRQALLLQRVGFGPDAMTARE ALEIATLGGAKVLNRNDIGALAPGMVADFVAFDLGHVAYAGGHHDPLAALVFCTPTQVHT SVINGRVVVKDGQLATVDLPRVLERHNQLAHQLVSGT