Protein Info for PP_1657 in Pseudomonas putida KT2440

Annotation: modified nucleoside triphosphate pyrophosphohydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 277 TIGR00444: MazG family protein" amino acids 11 to 267 (257 residues), 327.7 bits, see alignment E=2.6e-102 PF03819: MazG" amino acids 28 to 101 (74 residues), 91.4 bits, see alignment E=3.6e-30 amino acids 180 to 236 (57 residues), 36.3 bits, see alignment E=5.7e-13 PF01503: PRA-PH" amino acids 177 to 228 (52 residues), 24.7 bits, see alignment 2.4e-09

Best Hits

Swiss-Prot: 53% identical to MAZG_ECOLI: Nucleoside triphosphate pyrophosphohydrolase (mazG) from Escherichia coli (strain K12)

KEGG orthology group: K02428, nucleoside-triphosphate pyrophosphatase [EC: 3.6.1.19] (inferred from 100% identity to ppu:PP_1657)

MetaCyc: 53% identical to nucleoside triphosphate pyrophosphohydrolase (Escherichia coli K-12 substr. MG1655)
Nucleotide diphosphatase. [EC: 3.6.1.9]

Predicted SEED Role

"Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)" (EC 3.6.1.8)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.6.1.19 or 3.6.1.8 or 3.6.1.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q88MB7 at UniProt or InterPro

Protein Sequence (277 amino acids)

>PP_1657 modified nucleoside triphosphate pyrophosphohydrolase (Pseudomonas putida KT2440)
MTYTLDDLLHLMARLRDPQYGCPWDLKQNYASIVPHTIEEAYEVADTIERGDFEHLQGEL
GDLLFQVVYYSQLAREEGRFEFDGVVDSITRKLIRRHPHVFPTGELYAPVDTPSLSEAQV
KSRWEEIKAEERAEKSQPEQLSLLDDVPATLPALSRAAKLQKRAATVGFDWPAALPVLDK
VREELDEVLQAMADGDADALEDEVGDLLFAAVNLARHLKQDPEHALRRANRKFERRFRFI
EQALRDSGRPIEDCDLDELDALWGEAKRQEKNLPSCG