Protein Info for OKGIIK_02405 in Rhodanobacter sp. FW510-T8

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 492 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 50 to 70 (21 residues), see Phobius details amino acids 82 to 98 (17 residues), see Phobius details amino acids 104 to 122 (19 residues), see Phobius details amino acids 142 to 163 (22 residues), see Phobius details amino acids 183 to 201 (19 residues), see Phobius details amino acids 228 to 250 (23 residues), see Phobius details amino acids 256 to 274 (19 residues), see Phobius details amino acids 301 to 322 (22 residues), see Phobius details amino acids 342 to 365 (24 residues), see Phobius details amino acids 372 to 391 (20 residues), see Phobius details amino acids 397 to 418 (22 residues), see Phobius details amino acids 430 to 457 (28 residues), see Phobius details amino acids 463 to 483 (21 residues), see Phobius details PF07690: MFS_1" amino acids 16 to 446 (431 residues), 69.6 bits, see alignment E=2.4e-23 PF13347: MFS_2" amino acids 54 to 210 (157 residues), 28.2 bits, see alignment E=7.1e-11

Best Hits

KEGG orthology group: None (inferred from 62% identity to psm:PSM_A1381)

Predicted SEED Role

"Predicted maltose transporter MalT" in subsystem Maltose and Maltodextrin Utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (492 amino acids)

>OKGIIK_02405 MFS transporter (Rhodanobacter sp. FW510-T8)
MSKAKPELSFWQIWHMCFGFLGIQFGFALQNANVSRIFQTLGANVDQIPVLWIAAPFTGL
IVQPVIGYFSDRTWNRFGRRRPYFFAGAVLATLALLAMPNSPTLWIAAGLLWIMDASFNV
SMEPFRAFVGDQLPPSQRPLGYAMQSVFIGVGAVVASFLPYVLTHLGVANTAPAGEVPHS
VKYAFYAGAAVLLGAMLWTILGTREYPPEQLESFSDNRVEEAPGSVAGAWKIGMLMLVLG
LVLLGLIRRFALEKELYLLAGGLAGFGALFVWLSRSRSDGALRHIMGDLHGMPLPMRRLN
WVQFFSWFAMFAMWINTTAAVSQTFYGSSDTTSVAYNEGANWAGVLMGTYNGVGVLAAIA
IPLLVRACGLRLSHLVNLWLGGLGLLSFLLIHDPRWLIASMVGVGFAWASILSLPYAMLS
DNLPAAKMGIYMGIFNFFIVIPQLLAASVLGVLLKLFFHNQPIWALGLGGVSLLVAGLCT
LRVPEPATTPPP