Protein Info for OHPLBJKB_02610 in Escherichia coli HS(pFamp)R (ATCC 700891)

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 PF17773: UPF0176_N" amino acids 25 to 117 (93 residues), 78.2 bits, see alignment E=7.7e-26 PF00581: Rhodanese" amino acids 138 to 233 (96 residues), 61.2 bits, see alignment E=1.8e-20 PF12368: Rhodanese_C" amino acids 246 to 307 (62 residues), 75.9 bits, see alignment E=3.7e-25

Best Hits

Swiss-Prot: 100% identical to YCEA_ECOHS: UPF0176 protein YceA (yceA) from Escherichia coli O9:H4 (strain HS)

KEGG orthology group: K07146, UPF0176 protein (inferred from 99% identity to eco:b1055)

MetaCyc: 99% identical to tRNA U34 hydroxylase TrhO (Escherichia coli K-12 substr. MG1655)
RXN0-7349

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (350 amino acids)

>OHPLBJKB_02610 hypothetical protein (Escherichia coli HS(pFamp)R (ATCC 700891))
MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYL
AHEGINAQISVPASNVETFRAQLYAFDSALDGLRLNIALDDDGKSFWVLRMKVRDRIVAD
GIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQ
LPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGL
PVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYK
GCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLGIPDPTE