Protein Info for OH686_16945 in Pseudomonas sp. S08-1

Annotation: Glutathione S-transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 208 PF13409: GST_N_2" amino acids 11 to 73 (63 residues), 36.4 bits, see alignment E=1.6e-12 PF13417: GST_N_3" amino acids 17 to 77 (61 residues), 30.9 bits, see alignment E=7e-11 PF14497: GST_C_3" amino acids 123 to 198 (76 residues), 22.2 bits, see alignment E=3.3e-08 PF13410: GST_C_2" amino acids 127 to 185 (59 residues), 28.9 bits, see alignment E=2.6e-10 PF00043: GST_C" amino acids 129 to 194 (66 residues), 36.1 bits, see alignment E=1.5e-12

Best Hits

Swiss-Prot: 37% identical to GST_XANCP: Glutathione S-transferase GST-4.5 (gst) from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)

KEGG orthology group: K00799, glutathione S-transferase [EC: 2.5.1.18] (inferred from 72% identity to avn:Avin_22380)

Predicted SEED Role

"Glutathione S-transferase (EC 2.5.1.18)" in subsystem Glutathione: Non-redox reactions (EC 2.5.1.18)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.5.1.18

Use Curated BLAST to search for 2.5.1.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (208 amino acids)

>OH686_16945 Glutathione S-transferase  (Pseudomonas sp. S08-1)
MPTLYISPGACSLASHIVVHELALPIQVEQVALRTPDSPIHAINPLGRVPALQLDDGTLL
TENSALLPYLADQVPDTPLFAPVGSAERAQIQGWLGYLAAEVHTASFRPLNRPERYSADE
AVHPGIRAQALQQLYKAFEHIDRHLQGRQWLVGERYTLADAYLGLFANWLLRLGAPFDQL
THVARLREQWAARPAVQQALRTEGLLKD