Protein Info for OH686_08335 in Pseudomonas sp. S08-1

Annotation: Transcriptional regulator MraZ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 134 TIGR00242: division/cell wall cluster transcriptional repressor MraZ" amino acids 1 to 118 (118 residues), 120.4 bits, see alignment E=3e-39 PF02381: MraZ" amino acids 2 to 58 (57 residues), 27.3 bits, see alignment E=1.4e-10 amino acids 61 to 114 (54 residues), 53.4 bits, see alignment E=1e-18

Best Hits

Swiss-Prot: 90% identical to MRAZ_PSEAE: Transcriptional regulator MraZ (mraZ) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K03925, MraZ protein (inferred from 90% identity to pag:PLES_48001)

Predicted SEED Role

"Cell division protein MraZ" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (134 amino acids)

>OH686_08335 Transcriptional regulator MraZ (Pseudomonas sp. S08-1)
MPSRYRDELVSRCAGQLIVTIDAVDPCLCVYPLPEWELIEAKLRDLPSLREETRRLQRLL
IGNAVDIELDGSGRFLVPPRLRAHAGLDKHAMLVGQLNKFQLWNEDAWNALADADLAAIK
QPGALPDDLRDLIL