Protein Info for NIAGMN_16805 in Escherichia coli ECRC102
Name: hybG
Annotation: hydrogenase maturation factor HybG
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to HYBG_ECOLI: Hydrogenase maturation factor HybG (hybG) from Escherichia coli (strain K12)
KEGG orthology group: K04653, hydrogenase expression/formation protein HypC (inferred from 100% identity to eco:b2990)MetaCyc: 58% identical to hydrogenase maturation factor HypC (Escherichia coli K-12 substr. MG1655)
Predicted SEED Role
"[NiFe] hydrogenase metallocenter assembly protein HybG" in subsystem NiFe hydrogenase maturation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (82 amino acids)
>NIAGMN_16805 hydrogenase maturation factor HybG (Escherichia coli ECRC102) MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADLLGQWVLVHVGFAMSII DEDEAKATLDALRQMDYDITSA