Protein Info for NIAGMN_09340 in Escherichia coli ECRC102

Name: espX6
Annotation: T3SS effector pentapeptide repeat protein EspX6

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 735 PF00805: Pentapeptide" amino acids 394 to 427 (34 residues), 20.9 bits, see alignment (E = 3.2e-08) amino acids 429 to 457 (29 residues), 22.2 bits, see alignment (E = 1.2e-08) amino acids 465 to 502 (38 residues), 36.2 bits, see alignment 5.1e-13 amino acids 558 to 588 (31 residues), 31.3 bits, see alignment (E = 1.8e-11) PF13599: Pentapeptide_4" amino acids 400 to 457 (58 residues), 34.1 bits, see alignment 4.1e-12

Best Hits

KEGG orthology group: None (inferred from 100% identity to ecs:ECs5295)

Predicted SEED Role

"FIG00638183: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (735 amino acids)

>NIAGMN_09340 T3SS effector pentapeptide repeat protein EspX6 (Escherichia coli ECRC102)
MGSLFNIYKDIFPTLGMYSGLKACHEKNNLPFDINTEIETIQKQINYDINHLNDGLIKRV
LNLFIHLISNPDNLELTLNRYSSTTEQIIGRTKRNGLHEFDDGDLKIIFNRQDDNESVLT
VKDKDKDKDKDKDKDKDISHHCNVKTEQLQQFIKIMEQKAQLPIYIDKNNLKESIFSVLH
NDPQQVDKDQHLPCEKFLKHACKSSNSFEVKLDATHQYQHLNNFMISFDPVENQLTIRDN
NNKTETFSFTNLQWENLLQYYKENHQQPNIAGSRNLTDNIDKIKNTISTSEIIECASPEI
RSSVLNDLYSIANFLPDNNLTPNESWKRFCETCERFYVAQKSITGDKSERLTRKLSISDA
GITMTFKIGDVVINTISTAIPEDATGQRCIEGLNLAEMDLTDIDLSKMALRNVNFNGSIL
RNAKFSGTICEGVDFTDCDLRNAEFENASLENNDFRKVRHLTYVNFKNANLRNSNFNGKV
LTGVTFTGSDLSNAYLEHIDFTTVILYETSKIPGIPGTPQIPGTPKVILTGAILNYSDLS
GKDLSEYNLTGILCMYTNFSNANLTNCKISNANFSNAKFYNTNCTGANCSNILFDYAWFD
NTIFIKTLFKNTCFYNVRAKNVYLEGAYLNNDNIVNQANNSTEKQSIDSTDKQANDSTVQ
QSIDSTVQQANDSTDKQANDNIDKQVNDSTDKQAKNSTEQQDSNSFNQARLKKEVNRRFS
IPGLTSYQPTYIVEE