Protein Info for MPMX26_03200 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 transmembrane" amino acids 53 to 73 (21 residues), see Phobius details PF03743: TrbI" amino acids 266 to 444 (179 residues), 183.7 bits, see alignment E=1.8e-58

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (450 amino acids)

>MPMX26_03200 hypothetical protein (Acinetobacter radioresistens SK82)
MTNKNEFDTPDNFSTNDHVFYGDEKKGKDDFEIKDDFSEKSKTSVKDMDKAKLIKVGVIL
FVVIGLVISAVYFKLQKNKESRLESGVETAVAKPVTNIEGTGLSEDRFGFGGPQPIPALT
EPNPLPTANEKSPEQLEMERQLAAQQQQLAMEQEQARQQAIAQQQALLNARYKSGIMVTG
QSQSNSGISPNNAAGDMAGVPPELMPLFMSMQSSQANNNGGANTSNVNPRIANNSASSMG
GRFDSSTTNQKAPIAHASYNADRRLLIQQGKIVDAVLETAVKSDLPSNIIARVTTDIYGE
QGRNRLLPAGTRLFGQYSSIVNDGQAEVAAVWNRAITPNGVEIMLDSPSTNGLGVAGLGG
KVNNHYGRIFGTATLLSVIGAGVSNVGVSSSDQNNASQAYRTEVANSFGNQADRVLQRNL
SIPPTITVPHGTRIKVLVAKDLDFSTIFNQ