Protein Info for MPMX26_03168 in Acinetobacter radioresistens SK82

Annotation: Bicarbonate transporter BicA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 495 transmembrane" amino acids 17 to 39 (23 residues), see Phobius details amino acids 45 to 76 (32 residues), see Phobius details amino acids 86 to 106 (21 residues), see Phobius details amino acids 118 to 136 (19 residues), see Phobius details amino acids 142 to 162 (21 residues), see Phobius details amino acids 171 to 191 (21 residues), see Phobius details amino acids 216 to 236 (21 residues), see Phobius details amino acids 263 to 285 (23 residues), see Phobius details amino acids 293 to 312 (20 residues), see Phobius details amino acids 318 to 337 (20 residues), see Phobius details amino acids 352 to 383 (32 residues), see Phobius details PF00916: Sulfate_transp" amino acids 14 to 354 (341 residues), 184.3 bits, see alignment E=3.2e-58 PF01740: STAS" amino acids 396 to 486 (91 residues), 53.2 bits, see alignment E=2.3e-18

Best Hits

KEGG orthology group: None (inferred from 97% identity to abn:AB57_0557)

Predicted SEED Role

"Sulfate permease" in subsystem Cysteine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (495 amino acids)

>MPMX26_03168 Bicarbonate transporter BicA (Acinetobacter radioresistens SK82)
MLSTIREQWFSNIRGDVLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFCIAVVIAFVG
GRPGMISAATGAMALLMVTLVKEHGLQYLLAATILTGFIQILAGYLKLGALMRFVSKSVV
IGFVNALAILIFMAQLPELTNVTWHVYAMTIGGLAIIYLFPYIPVIGKLLPSPLICIVLL
TLFALLIGLDVRTVGDMGQLPDTLPIFLLPDIPLNLETLAIILPYSLGLAAVGLLESMMT
ATIVDDLTDTNSDKNRECKGQGVANIASGFLGGMAGCAMIGQSIINVKSGGRTRLSTFSA
GVFLLIMVVFISDWLKVIPMAALVAVMIMVSIGTFNWDSLRNIRQYPLSSNIVMIVTVIV
VVATHNLAYGVLVGVLLSALFFANKIERYMAIQSEFNEPENTRIYTVTGQVFFSSSDKFT
SAFDFKEALSKVVIDVSQAHFWDVSAVAAVDKVVIKFRREGTEVELIGMNEASKTLVDKF
GIHDKPDALDRLNSH