Protein Info for MPMX26_03109 in Acinetobacter radioresistens SK82

Annotation: NADPH-dependent FMN reductase ArsH

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 177 TIGR02690: arsenical resistance protein ArsH" amino acids 4 to 163 (160 residues), 303.9 bits, see alignment E=2.2e-95 PF03358: FMN_red" amino acids 13 to 114 (102 residues), 77.3 bits, see alignment E=4.8e-26

Best Hits

Predicted SEED Role

"Arsenic resistance protein ArsH" in subsystem Arsenic resistance

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (177 amino acids)

>MPMX26_03109 NADPH-dependent FMN reductase ArsH (Acinetobacter radioresistens SK82)
MCFICIYHLWGLPLPEDADTEHPKVKELHELLAWSEGMVWCSPERHGSMSSIFKSQIDWI
PLAGGAIRATQGKTLALMQVSGGSQSFNSLNQMRILGRWMRMITIPNQSSIPKAFLEFEE
DGRMKPSAFYDRIVDVMEELFKFTLLTRGQSKYLTDRYSERKESAEELSKRVNQRSL