Protein Info for MPMX26_02914 in Acinetobacter radioresistens SK82

Annotation: Protein DedA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 177 transmembrane" amino acids 16 to 39 (24 residues), see Phobius details amino acids 51 to 77 (27 residues), see Phobius details amino acids 118 to 133 (16 residues), see Phobius details amino acids 146 to 173 (28 residues), see Phobius details PF09335: SNARE_assoc" amino acids 39 to 164 (126 residues), 75.8 bits, see alignment E=2.2e-25

Best Hits

KEGG orthology group: None (inferred from 61% identity to aci:ACIAD2471)

Predicted SEED Role

"DedA protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (177 amino acids)

>MPMX26_02914 Protein DedA (Acinetobacter radioresistens SK82)
MLGFEQHLPGFIEAYGMWVYALLFMIIFAETAFIAMFFLPGDSLLLSVGALCASVDFMHL
DFMIMLLFAAATLGYIVNYHTGKFFGPQITSVKSRFIKPEHLARTNRYFVRHGGKTILMA
RFIPFVRSVAPFAAGANQMNYPMFLLYNLLGGLFWIGLLLGLGYFAGSTIFLINEIT