Protein Info for MPMX26_02844 in Acinetobacter radioresistens SK82

Annotation: PanD regulatory factor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 125 PF00583: Acetyltransf_1" amino acids 22 to 107 (86 residues), 33 bits, see alignment E=1.3e-11 PF12568: PanZ" amino acids 34 to 100 (67 residues), 36.2 bits, see alignment E=8.2e-13 PF13673: Acetyltransf_10" amino acids 37 to 106 (70 residues), 30.8 bits, see alignment E=5.1e-11 PF13508: Acetyltransf_7" amino acids 49 to 103 (55 residues), 34.4 bits, see alignment E=4.8e-12

Best Hits

KEGG orthology group: None (inferred from 88% identity to aci:ACIAD3394)

Predicted SEED Role

"FIG00349941: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (125 amino acids)

>MPMX26_02844 PanD regulatory factor (Acinetobacter radioresistens SK82)
MPITVHAHTSLENAEVRSQLERLYDTSPEFGDGQDAVEQLEQHLAQYTTLYTAEFNTKII
GAIWCTGQGESKTLEYIVVHPANRGRGVAERLVSEVCRYEEAKEVKRFEPGCGAIHRCLA
HLGKL