Protein Info for MPMX26_02753 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 368 transmembrane" amino acids 24 to 44 (21 residues), see Phobius details amino acids 50 to 71 (22 residues), see Phobius details amino acids 83 to 113 (31 residues), see Phobius details amino acids 144 to 166 (23 residues), see Phobius details PF04982: HPP" amino acids 53 to 172 (120 residues), 137 bits, see alignment E=3.6e-44 PF00571: CBS" amino acids 237 to 290 (54 residues), 39.8 bits, see alignment 4.7e-14 amino acids 304 to 357 (54 residues), 49.6 bits, see alignment 4.1e-17

Best Hits

KEGG orthology group: K07168, CBS domain-containing membrane protein (inferred from 81% identity to abn:AB57_3566)

Predicted SEED Role

"Probable transmembrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (368 amino acids)

>MPMX26_02753 hypothetical protein (Acinetobacter radioresistens SK82)
MSNSQFWLDTLKPNFKTLPLKERLLCGCGALLGLAISSIISWYTLGGINAWYIAPMGASS
VLLFAVPASPLAQPWNMVVGNTIAGLIGVSCALWIPDLTSAFSLAVGLSIFLMMTTDSLH
PPSGAVAITAVLGGEGVHHLGYQFLFYPVLLNSVLLLGFAIFFNRLLGRHYPYPRQVNER
SKDPTPTQKVTIQPQDIQQALEHQTELLDISQYDLEKIILEAQERANERIVLHYHCRDIM
SRDVIVLHENDDIHKALDKFKQVNLMSLPVVNASEHLVGTLALYDVVEWFKRGADYRASW
EYLVKQIMNRKVVTVHPEQPIQDLAPYFVEKSFNYIPVVEAEQLIGIISRADMIAAMQQE
ILHLRQKP