Protein Info for MPMX26_02725 in Acinetobacter radioresistens SK82

Annotation: Flavohemoprotein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 253 PF00042: Globin" amino acids 27 to 130 (104 residues), 51 bits, see alignment E=1e-17

Best Hits

KEGG orthology group: K05916, nitric oxide dioxygenase [EC: 1.14.12.17] (inferred from 74% identity to acd:AOLE_02065)

Predicted SEED Role

"Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)" in subsystem Bacterial hemoglobins or Flavohaemoglobin or Glutaredoxins (EC 1.14.12.17)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.14.12.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (253 amino acids)

>MPMX26_02725 Flavohemoprotein (Acinetobacter radioresistens SK82)
MNSQQIELVQSTVPVLRENGVALTSYFYKRMLNNHPELKNVFNLDHQSTGRQPRALAAAV
LAYAEHIENPAVLAKAVERITTKHVSLDIQPDQYAIVGDNLLHSISEVLDVPFESELIEA
WKQAYLQLADILIGVEKQKYSNLAEHQGGWAGWRPFKITQVEDVEGGKRFTIESADGQPI
SPADAGAFISVRVHVPGQELLQPLQFSFQEAQENSYTFVVKPDPTPTEYSVEDILLNHYK
AGDQVDVTAPVSF