Protein Info for MPMX26_02688 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 759 transmembrane" amino acids 20 to 42 (23 residues), see Phobius details amino acids 162 to 182 (21 residues), see Phobius details amino acids 196 to 213 (18 residues), see Phobius details amino acids 233 to 253 (21 residues), see Phobius details amino acids 265 to 290 (26 residues), see Phobius details amino acids 300 to 323 (24 residues), see Phobius details amino acids 347 to 376 (30 residues), see Phobius details amino acids 388 to 414 (27 residues), see Phobius details amino acids 427 to 446 (20 residues), see Phobius details amino acids 467 to 488 (22 residues), see Phobius details amino acids 495 to 511 (17 residues), see Phobius details amino acids 597 to 618 (22 residues), see Phobius details amino acids 631 to 648 (18 residues), see Phobius details amino acids 655 to 673 (19 residues), see Phobius details amino acids 679 to 698 (20 residues), see Phobius details amino acids 731 to 752 (22 residues), see Phobius details PF06808: DctM" amino acids 598 to 750 (153 residues), 57 bits, see alignment E=8e-20

Best Hits

Predicted SEED Role

"TRAP-type C4-dicarboxylate transport system, large permease component"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (759 amino acids)

>MPMX26_02688 hypothetical protein (Acinetobacter radioresistens SK82)
MQPTQKQTGLGRLSYIWTEWISTFVILVLLLLTLVIGTGEMIHGQLLRMGERLYGDPASG
MQYSFLRAEPEKPTCERHPDIDAQVQKQMQANAADEFADIFGTASEADVRASILAGQQLC
EEKYQFHDRAVTYIDDHSTLRTYRAVETSFFGVFQFGTENRALILVIMVVFAAISATLKT
HHIGLRSPATRIDYKVYSVFMLAANLLLTSSALSQYHSMMNAGVEIGREIQIIYGLWITL
FGILSLISLFYLFKPPKPSREGGSFGLAFLSVPLYVYMAVITGVAFTFFMDYPMGQGIYL
GQLVEFSSIFLNLALFIWAGMLLKQTQIVDMFLNILRPWNLAPETLTWLILLAAALPTAY
TGASGIFVIAAGAIIYKEVWLSGGRRQFALAASAMSGSLGVVLRPCLLIVVVASLNKEVT
TDLLYHYGLYVFLLTSTLFLVISLFFAERKFRIAAPSVAFPKSFRAIGPVLPYVLIFVLI
WLFYKYILATDLNEFTAPVMMPVILLMIVLFDKLRQSPEVVTTVGYNPAVDRYAVTMGDP
ATLTTVNTAIPPTEYHQVVTANATQGMSADHSVARSGLVKEPQVGFKRALHLSTSETVGH
IGALVILMALSVSVGGFLERIEIMSAFPTDISNTFLVLAMIVAVMVFVGMIMDPFGAVIL
ISATIAPVAYQYGIHPVHFWMIALIGFELGYVTPPVALNHLLARQSIGDEEVADADAEVR
HKSFYYRYERWILPVIVMFPAMLIITFAPYIFKLFGWYQ