Protein Info for MPMX26_02411 in Acinetobacter radioresistens SK82

Annotation: Bacteriohemerythrin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 146 TIGR02481: hemerythrin-like metal-binding domain" amino acids 2 to 118 (117 residues), 99.8 bits, see alignment E=5.8e-33 PF01814: Hemerythrin" amino acids 9 to 119 (111 residues), 46.4 bits, see alignment E=2.8e-16

Best Hits

Swiss-Prot: 43% identical to HEMTB_PSEAB: Bacteriohemerythrin (PA14_42860) from Pseudomonas aeruginosa (strain UCBPP-PA14)

KEGG orthology group: K07216, hemerythrin (inferred from 80% identity to acb:A1S_0891)

Predicted SEED Role

"putative hemerythrin-like protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (146 amino acids)

>MPMX26_02411 Bacteriohemerythrin (Acinetobacter radioresistens SK82)
MKWSPEYNTGIDVIDDQHKRILDYINQIDQNTDRHHTKQILDDIIDYTQSHFTFEESLQE
EAGYKYRVPHKRVHDLFIKKIELYRQQFEQGASIEHELHEILSKWLINHIQHDDADYVGA
VKENMMGILKEKEKKKGKNWFARFFS