Protein Info for MPMX26_02338 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 826 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details transmembrane" amino acids 20 to 36 (17 residues), see Phobius details amino acids 262 to 286 (25 residues), see Phobius details amino acids 307 to 336 (30 residues), see Phobius details amino acids 357 to 357 (1 residues), see Phobius details amino acids 359 to 381 (23 residues), see Phobius details amino acids 399 to 420 (22 residues), see Phobius details amino acids 426 to 449 (24 residues), see Phobius details amino acids 470 to 489 (20 residues), see Phobius details amino acids 697 to 725 (29 residues), see Phobius details amino acids 751 to 775 (25 residues), see Phobius details amino acids 787 to 805 (19 residues), see Phobius details PF02687: FtsX" amino acids 266 to 373 (108 residues), 42.6 bits, see alignment E=2.8e-15 amino acids 704 to 809 (106 residues), 51.3 bits, see alignment E=5.6e-18

Best Hits

KEGG orthology group: K02004, (no description) (inferred from 68% identity to abn:AB57_1066)

Predicted SEED Role

"ABC transporter, permease protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (826 amino acids)

>MPMX26_02338 hypothetical protein (Acinetobacter radioresistens SK82)
MLSPVLKPLLTQSFRSSGIYLLIIALVLAISATTAVKFSNQQVQQAVALQAAEMLAADLV
LSDTAPLEQKWFQQARQLGLAQSKVTVFSSMVHTDDQFVMVNVKAIDQAFPLRGELQSTS
AAQTPNPGEVWLSPRALELLKVKVGDQIQIADGSFNVAAKIVKDSNQELGFSGFSPTVII
HQQDIARTEAIQVGSRVQYRLLMAGSPQQVQAFEKGFEQLTGQKQKNKIDTEQAGETTSL
QLRNAGEANTRLMKPLENLDTFLQLANILTILLCGIAIALTSQRYVMQNQDHLALLRCLG
ASKHSILWAYLILLVIIMLIAISFGAILGIGLGYGLLQLMLQLIPNLNIQFSALAMLQGP
LPVAMFTSAIVLLGFIGPSLWQLLNTPPIRVIRQQEKSVVSILVMLSTGLLSLVIFSVVL
TENLRLTAWVMLAIILLCTVLYGLVWLILKILKAAKGRISAYVRTPYQTALQITALALGL
SLITVLAVLRTDMLERWQQQLPVDAPNQFVYGLPPFDLEPFQQQVRQNGWAGTALYPNIR
GRLTEKNGQPFSSELIQKSNSLQRELNLTQTKQYPADNRIIEGAASFSRIGQVSVEAKTA
EELGIRVGDELGFSLPEGLLKARVINLRTVEWESFSPNFFFIFSPDTIDENAGSYLGSFY
VPEEDRPKLVNLIQQFPNTVFIDVSMILEQVKQLVNVLVQIITVLAVLVSISGFLVLLAC
LNLLLDERKQEVALLRSFGSSKHKLKQMLSLEIGLIGFISGAVACLFAEVISAIASYRME
LPIQLHAEIWLCLPLVMTVVCAIIGRYRLSYLCDIPPLESLRSINQ