Protein Info for MPMX26_02332 in Acinetobacter radioresistens SK82

Annotation: Rubredoxin-NAD(+) reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 PF07992: Pyr_redox_2" amino acids 4 to 291 (288 residues), 198.3 bits, see alignment E=1.1e-61 PF13738: Pyr_redox_3" amino acids 64 to 280 (217 residues), 59.9 bits, see alignment E=1.6e-19 PF00070: Pyr_redox" amino acids 150 to 222 (73 residues), 66.7 bits, see alignment E=1.3e-21 PF18113: Rbx_binding" amino acids 313 to 384 (72 residues), 75.2 bits, see alignment E=1.7e-24

Best Hits

Swiss-Prot: 77% identical to RURE_ACIAD: Rubredoxin-NAD(+) reductase (rubB) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

KEGG orthology group: K05297, rubredoxin-NAD+ reductase [EC: 1.18.1.1] (inferred from 78% identity to abc:ACICU_00955)

Predicted SEED Role

"Rubredoxin-NAD(+) reductase (EC 1.18.1.1)" in subsystem Rubrerythrin (EC 1.18.1.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.18.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (392 amino acids)

>MPMX26_02332 Rubredoxin-NAD(+) reductase (Acinetobacter radioresistens SK82)
MDPIVIIGSGMAGYTLAREFRKLNTEQELVMICADDAVNYAKPTLSNALVGNKSPEQIPL
GDAQKMATQLNMQIETFTWVKEIHPEQHELLIEKDQQSRKQKYSKLILAVGANPVRLNIA
GNASEDIHVVNSLIDYRTFRENLSSRKDKRVVILGAGLIGCEFANDLQHTGHDVTVIDLS
SQPLGRLLPQHVASSFQHKLEQAGIKFVFNTTVEQVNKIENDDYVVSLANGKVLEADIVL
SAIGLQPNLELAKAAQIQTSRGIVTNGLLETSQPDIYAVGDCAEVNGTLLPYVMPIMQQA
RALAKTLNGEHTHVHYPAMPVAVKTPAAPLTVLPAPLDIEVSWENEEFEDGLIAKAVDAS
GTLRGFVLLGPTAGKQRLNLAKQVPDLIPPQV