Protein Info for MPMX26_02129 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 524 transmembrane" amino acids 17 to 40 (24 residues), see Phobius details amino acids 286 to 309 (24 residues), see Phobius details PF02743: dCache_1" amino acids 61 to 272 (212 residues), 51.7 bits, see alignment E=8.8e-18 TIGR00254: diguanylate cyclase (GGDEF) domain" amino acids 369 to 522 (154 residues), 157.8 bits, see alignment E=9.9e-51 PF00990: GGDEF" amino acids 371 to 519 (149 residues), 148.2 bits, see alignment E=1.8e-47

Best Hits

Predicted SEED Role

"GGDEF domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (524 amino acids)

>MPMX26_02129 hypothetical protein (Acinetobacter radioresistens SK82)
MSHISFIHALNLNLRKLILILTIFAVSCLFIISLLIGHYIAKKELINDSLALNYEYAFKI
ANSTDNYFRNLLSELKHSTLAVSYSFDNNKLRQYEVDRLKNQAHYFNAVIIGDRRGNILN
FSPASFDSGQLTNQDLLNFKHLAQSKQPYISQPYYSIRHNLIIFIAQPIFNKQNIYQGYM
GVVINLNEKNIISDLLASEYGYKKNYMYVIDQSRQIIFHPDSARIGSIMTNNTALSYMNQ
INRGRVELINSRGIENLAGFARISTTNWIVVSQQPTRELLKQANSVIYKVSVVILLFYLL
IFLVIWKLSLFISSPLNHLAKMASRLNQPEIEQKIQAISPWYYEVQKFKLSLLLSAQNFS
KKISEMNHHVNSDPLTGLYNRRGIDIFIKEMVDNHTPFSILLIDVDYFKKINDTYGHIQG
DIVLKQIAGHLRTNFRKDDICCRCGGEEFAVLMPTIDKKAVYNSAERLRKKIESNITNLS
GPVTISIGIAYWPESSKSTEEVFKIADHYLYQAKREGRNCVRGP