Protein Info for MPMX26_01332 in Acinetobacter radioresistens SK82

Annotation: Peptidyl-prolyl cis-trans isomerase D

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 623 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details PF13623: SurA_N_2" amino acids 1 to 137 (137 residues), 99.6 bits, see alignment E=3.7e-32 PF13624: SurA_N_3" amino acids 1 to 159 (159 residues), 134.8 bits, see alignment E=6.6e-43 PF13145: Rotamase_2" amino acids 245 to 373 (129 residues), 37.2 bits, see alignment E=1.2e-12 PF13616: Rotamase_3" amino acids 256 to 362 (107 residues), 99.1 bits, see alignment E=6.4e-32 PF00639: Rotamase" amino acids 271 to 361 (91 residues), 84.8 bits, see alignment E=1.8e-27

Best Hits

KEGG orthology group: K03770, peptidyl-prolyl cis-trans isomerase D [EC: 5.2.1.8] (inferred from 70% identity to abm:ABSDF1858)

Predicted SEED Role

"Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)" (EC 5.2.1.8)

Isozymes

Compare fitness of predicted isozymes for: 5.2.1.8

Use Curated BLAST to search for 5.2.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (623 amino acids)

>MPMX26_01332 Peptidyl-prolyl cis-trans isomerase D (Acinetobacter radioresistens SK82)
MESFRKVIKGWLGIVLLILFLTPLAFVGIEGYFSGGNKENVAATVNGQEISKKELESLTK
SYKEQYLNFVNGDETLLNQPFIQQTALDHLIAQNLILQQAEKLGISLSDAQIEQMLAQQP
SFQQNGQFSQTLYENYLRSVGLTSQGLIANLRQDHALKMLNSTFVDYTLVSKVDMNQIAN
LQTEQRTLFLSSIPLDEYKKNIQVSQQDIANYYQKHKNSFKQTAHVDVDYIVLSPEQVNT
KAAPVTDAELQQAYANFVEAQNKNAKREVKHILIATSDTRNENQAQKLANEVYAKIQGGT
NFAQAAAQYSDDIDSKTKGGLIESYQTGVYSEAFDKAVLGLKANQISQPVKTQYGYHIIQ
AQTLAQNIPSFEAEKSRLAAEIQKSKVANLFTDTVNSLNEMVVSSDSLDVVPQEIKGTRI
ETVKNVGLNTRHPVLNDPSVKARIFNEDVKNGDRNVTSNLQLATGEAVWVKVRDYQPEGV
QSLAQATPAIKTKIIDEKAAGLAAAKLKTMLDEFKTQPAQQVLAKHKVAFQSAGTFTRSQ
GLKRDVERAAFSVAAPKSGMWSVTTAALPNELVLVAVANVNKTTSNALTPEQLQELSKLY
QQLRGQQELEDYTQYLKSKAKIK