Protein Info for MPMX26_01226 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 187 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details PF07963: N_methyl" amino acids 10 to 31 (22 residues), 29.2 bits, see alignment (E = 2.5e-11) TIGR02532: prepilin-type N-terminal cleavage/methylation domain" amino acids 11 to 31 (21 residues), 29.8 bits, see alignment (E = 1.8e-11)

Best Hits

Predicted SEED Role

"General secretion pathway protein G"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (187 amino acids)

>MPMX26_01226 hypothetical protein (Acinetobacter radioresistens SK82)
MIRSSSSAHYGFTLIELMVVIVIIGITTSLVVMNLDGIDQRKAMQAREVFLLDLQKINRE
ANDQARILALETRSATDVNTFVYNLLEYQAAADMKTTTGFLAPTSEKWQKYSEFPSRHLP
PNVSFSIQPLDHDFQNASNEELLGSRAPKLIWLGNGEVRPVRIQFYLEQRPVGHEIEIDY
LGKISET