Protein Info for MPMX26_01064 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 706 TIGR00229: PAS domain S-box protein" amino acids 156 to 220 (65 residues), 25.5 bits, see alignment E=5.9e-10 PF00563: EAL" amino acids 463 to 695 (233 residues), 76.9 bits, see alignment E=8.4e-26

Best Hits

Predicted SEED Role

"FOG: PAS/PAC domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (706 amino acids)

>MPMX26_01064 hypothetical protein (Acinetobacter radioresistens SK82)
MRNPLLSKKFKRTETRLLIIDDNQIRYNQIIEIFAQQDHLVQAVLLDDLKSFEKQLHLDW
DLIIFGRAYDLKVEQALSIVQASTQPSLPVLLIKPDQYEPAQYNHYIYKGIYDVINLDFP
ERFYIGLVRALSYYRLVQAQQRLSIELEMAQNQAQTLVQESHKAVAIIQEGIHIQANNEY
LNLFGLEKEDEVIGLPLLDILQPEDLNDFKQRFKKISQGQFDQGHFEIRTLNSQVACSSA
LELEFVSAAEEDALQIRINCDSSNSNTVLSNNSSPQISEKNSSSVNPFQLVNRYLISQPA
KFNALVVFSLATCSDQIFKSDWNTLKTYFLNIEDFIREQTHTLVFKVHTILYGALFQAES
EEILESQLMSLRALEKAQLLTVNDVNFSLQLQIGYTLIPDEIRDNDHFEELLEYAFNHHL
PELEHEPELELTAPLEVEPAPVPEVPETALSAAISTPSLVQVLAQKLQQADIHLRYQQLY
DKQDINLYTYEVTSGIIYENRWQEFSGLADLQGNNELSIKLDRWVLVEACKQLHNFIRQY
PDARLIVNLNQHILFNDSQLPELVAKLITIIGSKQSHPLILQFAEEEILYNLPAAQKQIA
LLHQYGAEISIRNFGNSIYSESLLNQIELQYVTLAQQLTQLISNDKELGNLQEKIINFLA
IKPIEIILRELDDMNLFANAWNIEARYLEGNYFQKKLEFLTDVQDQ