Protein Info for MPMX26_00969 in Acinetobacter radioresistens SK82

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1262 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 38 to 59 (22 residues), see Phobius details amino acids 443 to 463 (21 residues), see Phobius details TIGR03348: type VI secretion protein IcmF" amino acids 41 to 1212 (1172 residues), 657.8 bits, see alignment E=1.9e-201 PF14331: IcmF-related_N" amino acids 188 to 445 (258 residues), 267.5 bits, see alignment E=2.3e-83 PF06761: IcmF-related" amino acids 496 to 837 (342 residues), 238 bits, see alignment E=3.6e-74 PF21070: IcmF_helical" amino acids 988 to 1078 (91 residues), 36.3 bits, see alignment 1.1e-12 PF06744: IcmF_C" amino acids 1106 to 1198 (93 residues), 72.3 bits, see alignment 6.7e-24

Best Hits

KEGG orthology group: K11891, type VI secretion system protein ImpL (inferred from 84% identity to aci:ACIAD2684)

Predicted SEED Role

"IcmF-related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1262 amino acids)

>MPMX26_00969 hypothetical protein (Acinetobacter radioresistens SK82)
MYIILGYLWQYITNPRAIIALSLFVALVSSYSVLPRHIFWALAASYMLGLICYGIYWLVQ
RRRHTVQGEELANAIQQDTKAEYGQQKNKEELQLINQQMKDSIQLIRKSKLGDKKGNAAL
YELPWYMVIGNPAAGKSSAIYNSGLKFPFEETHQKMISAGLSGTRNCDWFFSTEGVLLDT
AGRYSVYAEDHSEWLGFLNILKKNRSKAPVNGLIVIVSIAELIGQSPENSLKLAKNLRAR
IQDLTERLEVVVPVYLVFSKMDLIAGFTEFFDCYEAQEYNQAWGATLPYEQNSSQNAVEL
FEYHYNLLYDGLKGVSTTHLSRRHSQNISPSVMTFPLEFKTLKPALKSFISTLFEDNPYQ
FQPVFRGFYFTSALQEGIIESPMTKQIAQEFHLSQIPQAEPGDHNIAPQNHGYFLKGLFS
NIILKDKNLVKQHINPGRKRQRYLAFIGALLGVSIILGLWVWSYRNNQQLIADVQADLDK
VVHLEKASGQQLPTQLEALLILQERLQQLDEFDEHRPLKFRFGLYQGNQLRETLKAEYLK
GIRQIVLQPTQQNIAQYLQRVKNNEETLKANHINVEVKQVAKTGQYLEPLDTNPQDAYNA
LKAYLMMSNPQYMDAGHLSDQVTRFWRSWVDANRGQMSRGDMIQQAEQVLSYAMTLTGDQ
QFPVLDADTQLVDQTRQVLLSVIRGMPARDRVYNEIKMRAAVRFPALTAGQIVGENNKGA
VLGSYALPGVFTQKAWDEYVSSAIDEAANKPTDSKDWVLNSRQSDDLTFSGSPEQIRKQL
VALYKQEYIAEWRKFLNGIYYAKAPQFSQQSKNIDILGEPQNSPIRILFERIAIETNWDN
PVVQAELAVPQKGFIAWFKRKVLNRSDAQMSQQVSNKAQGPISQEYQMFYQLVRKRDDQQ
NKSLLDEYMQNLAQVRSKFNDLKNAGEIGPSAMALVKQTISDQNSVFNTAQKHIDERMLV
GLNDIDQQMIQKLLVSPLTQSFASLITPAQEELNKLWIIQAYQPFQANLSQKYPFNSSVS
LQATSNEIGQIFGDTGSIARFVKEILDPLVIRRGYTLTSKTWKDLGISLNPQFVMNFQRY
VAPINGMATGTLDQPTATPAANQSNFQFYPLQNPQLLSYTIDIDGQRMLYENGIQQWVNF
VWPNRSAIPGARITAVDLQGQTHTIFDEPGEYGINRLIDSAQRKEQNGSFEMVWRSKTDP
SVFVKVNFRLISGSSSGGIGSSRGYSGLQLVDKVTTDKAVRVVSAQPAPAVSAVVPRTGG
TS