Protein Info for MPMX26_00389 in Acinetobacter radioresistens SK82

Annotation: Ubiquinone biosynthesis O-methyltransferase, mitochondrial

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 198 PF05401: NodS" amino acids 14 to 124 (111 residues), 62.7 bits, see alignment E=1.5e-20 PF13489: Methyltransf_23" amino acids 24 to 148 (125 residues), 41.7 bits, see alignment E=3.5e-14 PF05175: MTS" amino acids 33 to 140 (108 residues), 36.5 bits, see alignment E=1.3e-12 PF13847: Methyltransf_31" amino acids 44 to 145 (102 residues), 41.4 bits, see alignment E=4.3e-14 PF13649: Methyltransf_25" amino acids 45 to 137 (93 residues), 49.8 bits, see alignment E=1.6e-16 PF08241: Methyltransf_11" amino acids 46 to 141 (96 residues), 43.4 bits, see alignment E=1.6e-14 PF08242: Methyltransf_12" amino acids 46 to 139 (94 residues), 41.7 bits, see alignment E=5.7e-14

Best Hits

KEGG orthology group: None (inferred from 55% identity to acd:AOLE_13135)

Predicted SEED Role

"Methyltransferase type 12"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (198 amino acids)

>MPMX26_00389 Ubiquinone biosynthesis O-methyltransferase, mitochondrial (Acinetobacter radioresistens SK82)
MPKQDYFDTLYHHNDDPWGYTQRWYEQRKRQICLALLPRQRYGRILELGCANGVFSQELA
SRCDELLGLDANSKAVELARQRLKGQLHIDIQQKRIPQQCPEEKFDLIVISEIAYYLNEN
ELLQLIEWAQRSLNDTGTLLCCHWRYPIDGFSLNGNLVHQLLKQHLKLYHYLGLDDPDFL
VDLWTTDSGSLAHQEGLI