Protein Info for MPMX26_00332 in Acinetobacter radioresistens SK82
Annotation: 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 46% identical to HCAD_PHOLL: 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component (hcaD) from Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
KEGG orthology group: K00529, ferredoxin--NAD+ reductase [EC: 1.18.1.3] (inferred from 46% identity to plu:plu2209)MetaCyc: 45% identical to putative 3-phenylpropionate/cinnamate dioxygenase ferredoxin reductase subunit (Escherichia coli K-12 substr. MG1655)
3-phenylpropanoate dioxygenase. [EC: 1.14.12.19]; 1.14.12.19 [EC: 1.14.12.19]
Predicted SEED Role
"Ferredoxin reductase" in subsystem Anaerobic respiratory reductases
MetaCyc Pathways
- 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation (6/8 steps found)
- 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate (3/5 steps found)
- cinnamate and 3-hydroxycinnamate degradation to 2-hydroxypentadienoate (3/5 steps found)
KEGG Metabolic Maps
Isozymes
Compare fitness of predicted isozymes for: 1.14.12.19, 1.18.1.3
Use Curated BLAST to search for 1.14.12.19 or 1.18.1.3
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (407 amino acids)
>MPMX26_00332 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component (Acinetobacter radioresistens SK82) MSIETIVIIGAGQAGASAILELRANGYIGKIILVGDEVHLPYERPPLSKDVILKPEETKV EILSVQKLAELGVEVIRGNAAVKIDADTHQLILKNGEVLGYDKLLLATGGAPRRLPDLDA LGKHVYTLRNLEDSQALVPVLQSERRIILVGGGVIGLELASSARSKHCHVTVIEMGPMVM GRCSPRLLSEFLLAQHRQAGIDIRLETRITGCSLQGEEVVIQLENGEELRADAVIYGVGI IPNVRLAVEAGLDVDFAVKVNENCQTSNPDIYAAGDVATQLRADGQYSRVETWENANQQA GIFARHVMGIEHPKANPAWFWTDQLGINFQFVGDMSAAEWHVRGTMDISQGPASSFILYG VSNGIIVAGITVNAAKDMRHLKKMISKGIAFHADTHLDLAQELRKIA