Protein Info for MPMX26_00266 in Acinetobacter radioresistens SK82

Annotation: Ubiquinone biosynthesis accessory factor UbiJ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: K03690, hypothetical protein (inferred from 75% identity to abc:ACICU_00363)

Predicted SEED Role

"Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes" in subsystem Ubiquinone Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (224 amino acids)

>MPMX26_00266 Ubiquinone biosynthesis accessory factor UbiJ (Acinetobacter radioresistens SK82)
MWSILALGAIERVIHHWIELDSLTRIQLNQLQGKMLRVVIASPQLSVDICFDEDEVRLEP
TITGHPEQSSVFEQRPFDPEHAFSEATATLKVENIVELAKLFLAEEIGNIPVQGDYRLLQ
ELQRIIQQAEPDLAAHLSPWIGPTLAHELGKLQLAPKILKRSMQSHFFFAEDALKEDSGL
FAGRWEMDELHHSTRQLNQNIDRLEARLQQLQAQLLSQSVQKQD