Protein Info for MPMX26_00056 in Acinetobacter radioresistens SK82

Annotation: Putative glycosyltransferase EpsF

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 373 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details transmembrane" amino acids 55 to 75 (21 residues), see Phobius details PF13439: Glyco_transf_4" amino acids 13 to 176 (164 residues), 55.6 bits, see alignment E=1.3e-18 PF13477: Glyco_trans_4_2" amino acids 47 to 137 (91 residues), 33.7 bits, see alignment E=8.2e-12 PF00534: Glycos_transf_1" amino acids 184 to 317 (134 residues), 83.6 bits, see alignment E=2.5e-27 PF13692: Glyco_trans_1_4" amino acids 199 to 334 (136 residues), 70.4 bits, see alignment E=4.1e-23

Best Hits

KEGG orthology group: None (inferred from 51% identity to pag:PLES_19141)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (373 amino acids)

>MPMX26_00056 Putative glycosyltransferase EpsF (Acinetobacter radioresistens SK82)
MKKIVHVIIGLNVGGAELMLKRLVLHSQQKGNLHHEVISLTDLGAIGQDLKEAGIRVYTL
NMSSLLSIFSIYFSLKKLLKEIKPDIVQTWMYHADFLGGLAAKSLDIQKIIWGIRTTDVT
QGASRLTVVLRKICAKLSYSVPTDIVCAAHVSKDVHIKIGYDASKMHVIPNGFELDKLVA
TEEDRNKIRQEFNIPKEATVIGSVGRFNVVKNQIFFVEVANQLVKTYPKLIFMLIGRDNT
IENSELMNWLRKYNLINNFRLLGQRNDIPACLKAMDIFCLHSKTEGFPNVLGEAMGLGVM
AVSTNVGDVPYLIDQEFIGSDLINMASIICNILENRIDIGKTIVSNKNKIDVLYSMDKLI
FNYELVYLEKSYE