Protein Info for MPMX19_06974 in Azospirillum sp. SherDot2

Annotation: 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF23441: SDR" amino acids 5 to 247 (243 residues), 41.4 bits, see alignment E=2.3e-14 PF00106: adh_short" amino acids 8 to 193 (186 residues), 187.6 bits, see alignment E=3.7e-59 PF08659: KR" amino acids 10 to 164 (155 residues), 35.3 bits, see alignment E=2.4e-12 PF13561: adh_short_C2" amino acids 14 to 247 (234 residues), 211.4 bits, see alignment E=3e-66

Best Hits

Swiss-Prot: 46% identical to TSAC_COMTE: 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 (tsaC1) from Comamonas testosteroni

KEGG orthology group: K00059, 3-oxoacyl-[acyl-carrier protein] reductase [EC: 1.1.1.100] (inferred from 61% identity to xau:Xaut_1358)

MetaCyc: 46% identical to 4-sulfobenzyl alcohol dehydrogenase subunit (Comamonas testosteroni T-2)
1.1.1.M5 [EC: 1.1.1.M5]; 4-(hydroxymethyl)benzenesulfonate dehydrogenase. [EC: 1.1.1.M5, 1.1.1.257]

Predicted SEED Role

No annotation

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.1.1.100

Use Curated BLAST to search for 1.1.1.100 or 1.1.1.257 or 1.1.1.M5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (250 amino acids)

>MPMX19_06974 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 (Azospirillum sp. SherDot2)
MTKRLDGKVALITGAAQGLGLAMAETFVREGARVAVVDINGDAAHAVAERLGEAAIGIKA
NVTSTADVEMTIAATVEKFGRLDILVNNAGSTHANGPFENVTEEEFDRVFALNVKSIYLY
SKAVVATMRAQKSGVILNLGSTAGLRPRPGLVWYNATKGAVHNITQSLALELAPDNIRVC
ALAPVATETPLLATFMGGDTPEKRARMLGIVPLGRLGQPSDVANAALYLASDEAAFITGV
VLEVDGGRCV