Protein Info for MPMX19_06946 in Azospirillum sp. SherDot2

Annotation: 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 282 PF00561: Abhydrolase_1" amino acids 34 to 145 (112 residues), 62.6 bits, see alignment E=7.3e-21 PF12697: Abhydrolase_6" amino acids 35 to 270 (236 residues), 56.3 bits, see alignment E=1.1e-18

Best Hits

KEGG orthology group: None (inferred from 66% identity to axy:AXYL_03189)

Predicted SEED Role

"2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-)" in subsystem Biphenyl Degradation or Central meta-cleavage pathway of aromatic compound degradation or carbazol degradation cluster (EC 3.7.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.7.1.-

Use Curated BLAST to search for 3.7.1.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (282 amino acids)

>MPMX19_06946 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (Azospirillum sp. SherDot2)
MRATIESITGRYMRLDYKGREHRIYFEEAGQGIPLVCLHTAGSDGRQFRGILNDPRITRD
FRVIAFDLPWHGKSSPPAGWQDGDYQLTSADYTDIILTVCRALELDRPVAMGCSIGGRIA
LHLAMEHAEEFRAIIGLQSSAHVHPYYDTTWLHHPDVHGGEVCAAIAAGLVGPNAPDAHR
WETVWHYMQGGPGIFKGDLYFYKVDGDIRHRLSEIDTSRCPLYLLTGEYDYSCSPADTLE
TAACIPGATVSIMPGLGHFPMSEDPEGFVAHLLPVLSEIAHR