Protein Info for MPMX19_06923 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 277 transmembrane" amino acids 6 to 29 (24 residues), see Phobius details amino acids 39 to 62 (24 residues), see Phobius details amino acids 72 to 92 (21 residues), see Phobius details amino acids 118 to 142 (25 residues), see Phobius details amino acids 153 to 172 (20 residues), see Phobius details amino acids 184 to 204 (21 residues), see Phobius details amino acids 224 to 242 (19 residues), see Phobius details amino acids 248 to 267 (20 residues), see Phobius details PF03239: FTR1" amino acids 5 to 265 (261 residues), 105 bits, see alignment E=2.3e-34

Best Hits

KEGG orthology group: K07243, high-affinity iron transporter (inferred from 50% identity to bgl:bglu_1g25510)

Predicted SEED Role

"High-affinity iron permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (277 amino acids)

>MPMX19_06923 hypothetical protein (Azospirillum sp. SherDot2)
MYANVIFVVWRESVEALLVVGILNAWLAVNAPGARRARVFLWSGALAGLVVAGALGGAFV
ALADALSDTALGIFRTAMVLVAAGLILQMVVWMRRHGRTMKRDLEGALGEAVTTENWWGV
FTLALIALTREGSEAVVFLYGILSVDLGDGRLPAIGAGVLGLLAAFATYALLQLGSHRLS
WKVFFRVTETMLLLLACALVVSGVDGLIDLDVLPVLSRRLWDSSWLLSDGGAFGGLVAGL
TGYRARPVLTELLAFIAYWSFVLWLIARPRQQRIVAA