Protein Info for MPMX19_06921 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 191 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details PF10634: Iron_transport" amino acids 34 to 184 (151 residues), 220 bits, see alignment E=8.5e-70

Best Hits

Swiss-Prot: 71% identical to Y820_BRUAB: UPF0423 protein BruAb2_0820 (BruAb2_0820) from Brucella abortus biovar 1 (strain 9-941)

KEGG orthology group: K07230, (no description) (inferred from 71% identity to bov:BOV_A0329)

MetaCyc: 71% identical to ferrous iron uptake system, iron-binding protein FtrA (Brucella abortus 2308)

Predicted SEED Role

"Periplasmic protein p19 involved in high-affinity Fe2+ transport" in subsystem Campylobacter Iron Metabolism or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (191 amino acids)

>MPMX19_06921 hypothetical protein (Azospirillum sp. SherDot2)
MSCIHIFNGCLQIMLRTAVFASILLMGTALSASAKEYPVGKPQTQEGLDVAAVYLQPIEM
EPAGMMRPAADSDVHLEADIKATKDNRNGFAKGDWVPDLVVEYTLTKDGAEVAKGPFMPM
VANDGPHYGDNVKMAGNGKYQLILKISPPSANQHVHFGRHVDKETGVAPWFKSFEAKYDF
VYAGTGKKGGY