Protein Info for MPMX19_06813 in Azospirillum sp. SherDot2

Annotation: putative MFS-type transporter YcaD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details transmembrane" amino acids 40 to 58 (19 residues), see Phobius details amino acids 70 to 89 (20 residues), see Phobius details amino acids 95 to 116 (22 residues), see Phobius details amino acids 128 to 147 (20 residues), see Phobius details amino acids 153 to 172 (20 residues), see Phobius details amino acids 193 to 216 (24 residues), see Phobius details amino acids 228 to 247 (20 residues), see Phobius details amino acids 258 to 278 (21 residues), see Phobius details amino acids 284 to 306 (23 residues), see Phobius details amino acids 317 to 339 (23 residues), see Phobius details amino acids 349 to 368 (20 residues), see Phobius details PF07690: MFS_1" amino acids 9 to 323 (315 residues), 74.8 bits, see alignment E=3.1e-25

Best Hits

KEGG orthology group: None (inferred from 36% identity to pzu:PHZ_c2637)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (425 amino acids)

>MPMX19_06813 putative MFS-type transporter YcaD (Azospirillum sp. SherDot2)
MMPPLLPVMAAAVLMQAGNGLLQALLPLRMQAQGLSAADIGMVASAYGVGFAAGCLAAPR
VVRKLGFVRAYAGLAALMAILALALPLAGGSVGWVLLRALTGVGFAGLFTVIEGWIGAGA
QDGNRGRILAVYMVTTKLALMTGPLLLDPGGDQPFRLLILLILLSVLPVAVTRPVRPALP
TAVSLDLGGLFRLAPSALVGCFAVGVVTGTMIAFAPLYGLRIGLSEPAAAALLVALQGGS
LLAQWPLGALSDRRDRRVVIAAVAATGAVLSAGLALLPAGSPAWLVWTGFALWGSQVLCI
YALCVAHACDVVPPGRIVPTVSGLLVVWAAGAMVGPVPGALLMDRLGPSGLFVYAAAGCT
ALAAFVLIRRAVRERDRAPGPPAFRPLPPDSLTGAAISGPRTTVEPSGTPPADIGPPGAP
PPDGR