Protein Info for MPMX19_06812 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 602 transmembrane" amino acids 409 to 430 (22 residues), see Phobius details PF17853: GGDEF_2" amino acids 358 to 483 (126 residues), 26.6 bits, see alignment E=1.3e-09 PF13556: HTH_30" amino acids 536 to 593 (58 residues), 72.1 bits, see alignment 5.3e-24

Best Hits

KEGG orthology group: None (inferred from 56% identity to mci:Mesci_6248)

Predicted SEED Role

"FIG00983807: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (602 amino acids)

>MPMX19_06812 hypothetical protein (Azospirillum sp. SherDot2)
MVETSRIQSLRVVASLINSGGDLATVLQRLVLAACRHANWSMGSIMAVDVEHGYALVVVR
HDPTLIQRPLPDRWELATSPSLVALRRNEPIFIPDARVSEEFPGYRREAFERDYHSVLVV
PMNCTDDSGRPLVLSVVSRGIIEVSEEDLAFIGMIVQLGEIAVERQHRLRAETLAAERLQ
RALEVNTSLLRQALEDGAMATLLPRIRDLLPYSIVIVDFTANLVTADRAPCGSDIGDADW
QAAVAADLGPSIMKAARDAIDHPVATGPAATGATLFWEVNGKRIRTAPRIDPLTADGEVV
GVLMIFPGPQPYGQADQLLLDGIKHALGIQMLRNVIRFRYENRTVTELFLELVERRWRDP
LDIGQRALRLGLNLDLPAQMILVGLPGRSPRAVSAAADLQLPVQRLLSLHGIAGTLVTVP
AGLVCLIPAVDERSHGPVKRLMAQIARSVADILHAEPFVVLTSRCMAPPDYAEAWDRSWR
MIRIAEEFGRPGVLDARQFGPLPMLLAAANTHEVRGYVADSIGALIEYDRQHGTPYLETL
SAYLKTGCRTKACSDQLGVHVTTLRYRLTRIEELFGIDVESPDRRFSVELAIHLSGVIDR
SP