Protein Info for MPMX19_06792 in Azospirillum sp. SherDot2

Annotation: 2-hydroxymuconic semialdehyde dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 507 TIGR02299: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase" amino acids 25 to 507 (483 residues), 801.6 bits, see alignment E=1.1e-245 PF00171: Aldedh" amino acids 35 to 493 (459 residues), 573.8 bits, see alignment E=1.2e-176

Best Hits

Swiss-Prot: 42% identical to AMNC_PSESP: 2-aminomuconic 6-semialdehyde dehydrogenase (amnC) from Pseudomonas sp.

KEGG orthology group: K00151, 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC: 1.2.1.60] (inferred from 71% identity to dge:Dgeo_2416)

MetaCyc: 42% identical to 2-aminomuconic 6-semialdehyde dehydrogenase monomer (Pseudomonas sp. AP3)
Aminomuconate-semialdehyde dehydrogenase. [EC: 1.2.1.32]

Predicted SEED Role

"5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60)" in subsystem 4-Hydroxyphenylacetic acid catabolic pathway or Aromatic amino acid degradation or Central meta-cleavage pathway of aromatic compound degradation (EC 1.2.1.60)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.2.1.32 or 1.2.1.60

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (507 amino acids)

>MPMX19_06792 2-hydroxymuconic semialdehyde dehydrogenase (Azospirillum sp. SherDot2)
MASAFETNLATAERLLTRFRDRPLGHFIDGREVPGQSERLFDNLSPIDGGIINRVHAGNA
ADVDAAATAAQRAFPAWAALPGTERKRILHRVADGILARAEEIAVLESLDSGQPIRFMSK
AAERAAENFRFFADRAPDAANGLSLPARDHLNFTVRQALGPVAVITPWNTPFMLSTWKIA
PALAAGCTVVHKPAEWSPLTAMLLAEIMADAGVPAGVANLVNGLGEEAGKLLTEHPAIKA
VAFVGESTTGSHIMAQGAPTLKRVHFELGGKNPVVVFDDADLDRALDAVVFMIYSLNGQR
CTSSSRLLVQSGIHDAFVERLAERVARIRVGHPLDPATEVGPLVHERHLNKVLGYCAIAR
EDGATVKVGGVRAGEPGSGGNYVRPTLFTGAHNRMRIAQEEIFGPVLTAIPFQDEAEAVA
VANDVAYGLAGYVWTRDVSRANRVALKLDAGMVWINSENNRHLPTPFGGMKASGIGRDGG
DYSFDFYMETKNICVALDTHTVPKLGA