Protein Info for MPMX19_06767 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 505 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 63 to 84 (22 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details amino acids 121 to 141 (21 residues), see Phobius details amino acids 183 to 207 (25 residues), see Phobius details amino acids 218 to 238 (21 residues), see Phobius details amino acids 265 to 282 (18 residues), see Phobius details amino acids 320 to 340 (21 residues), see Phobius details amino acids 352 to 374 (23 residues), see Phobius details amino acids 380 to 401 (22 residues), see Phobius details amino acids 422 to 450 (29 residues), see Phobius details amino acids 475 to 497 (23 residues), see Phobius details PF00528: BPD_transp_1" amino acids 79 to 244 (166 residues), 72.3 bits, see alignment E=2.3e-24 amino acids 332 to 501 (170 residues), 83.5 bits, see alignment E=8.3e-28

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (505 amino acids)

>MPMX19_06767 hypothetical protein (Azospirillum sp. SherDot2)
MTRAGIQRLLITAAAVLALEASCRLGYVGRATMIPPSEMLAELLRLMGTDGFWSQIGFTL
RNILAAAVAAMVVGFAGGVALHALPRVRRAVEPLIASYYALPFFVLYPLFIVLLGMNALP
IIAMGFLYAVMAMVTATLSGLDRIPPVLRKVGRTYRLDRVQDALLIQLPAAGPHIFTGVK
LALSYSVTGVIGAEFILAGSGLGYSIAFAYNNLQDRTMYALLLFVVVFVSSLTVLLHWAE
QRVRHRSGAGRVGAARDTAGAGEKLAAAAVIALLILGGWQLFHGLAGDEALASPAVTLNR
LVVLFGNPSFWENVAETAKALGLSLLISCIGGGLAGVLTGANRSLSDVLEPLFVTLYAIP
KVTLYPVILLLFGLGMPAKVAFGTLHGFIPMMLVTMGAIRAMNPVLRRSARAMRLTRMQT
LTAVLVPATVPEIVTGLRISFSITLLGVMVGEMFASKRGLGFMIMNGISVNDTATMMSVT
VLIGLFALAVNSALLALDNRMHRAA