Protein Info for MPMX19_06683 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1525 transmembrane" amino acids 93 to 117 (25 residues), see Phobius details amino acids 123 to 147 (25 residues), see Phobius details PF24801: FNIII-A_GpJ" amino acids 317 to 444 (128 residues), 114.6 bits, see alignment E=5.1e-37 PF13550: Phage-tail_3" amino acids 574 to 729 (156 residues), 75.9 bits, see alignment E=5.4e-25 PF09327: Phage_Tail_Tip" amino acids 1312 to 1438 (127 residues), 45.5 bits, see alignment E=1e-15

Best Hits

KEGG orthology group: None (inferred from 84% identity to azl:AZL_b05420)

Predicted SEED Role

"Phage tail fiber protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1525 amino acids)

>MPMX19_06683 hypothetical protein (Azospirillum sp. SherDot2)
MARIHLHGALGRQFGRLADYQVRDAAEAIRALAANHPDFDKVFREGSYRLVRGPRSRGGI
DLTLDTLTLGLGSTDLHIIPVPAGAKNGGAGKAIMGALVMAVALVASIPTGGTSLALGAE
FTVGGVGLGVSYGSVALFGAAMMLSGISQMLSPTPKANLPDNTQSYLFSGPANVSEQGGS
VPLVYGRCWVGSTVISSGMDTEQIGTVQPQPAASAATAASDGGPAGGIQGAKGGGKSGRG
GSGATEDPNSLQSAATARVIDLLSEGEIVGLVNEGKSIYFDGTPLIASDGTENFKGVTWE
ERRGIPSQEPISGFTASETTVGVGSEVKKAAPVVRTIHGDEVDAARIVLRWNALTEQDTS
NGNLRGSAVQVTIEGRAADGGWKVLVNDTVTGKTTSAYERSYKVGLRELGRSPYDIRVTR
VTDDPPRAAIQNSFSWSHYAEIVESKFGYDNSALVALTVKAEQFGNSIPERAYDVKGLKI
QVPSNYDPETRTYTGQWDGSLKTAWSDNPAWVLYDLLTNRRYGLGQSISAEAVDRWSLYT
IGVYCDQPVKSGRLDTSRRDIMEPRFTFNGVISGRTEAYRVLQSIASTFRGLIFWSAGGV
LARADMPADPIKLVTPANVIGGSFTYSGTALKARHTAALITFNDPDDGYRPTVEVVENAG
MIQRYGWRPIEATAYGCTRRSQARRLGLWMLDSEQHETETVTYRCSFDHLDVMPGDVVKL
ADPNWALVRTGGRLVAYDPERQVVTLDDTVTLEANQSHVLALTLPDGRLVDCPVRRPVLE
DHTTGQLVIDAAPLGGAVPQPHAVWILTATNLAPRLFRVRAVTEKSPGVYEVTALLHEPG
KYARVEEGVQIEPVATQSAANAIPSPANLAAVESAYWVNGLPQARLTVSWTPSDDARIAG
YRADVMTPGGQWQEWKVTRAGSFDIEPAAEGVYTLRITALAYDNRRSAPAEIRATVRGKG
TPPGQPAGLVAKGGLRQIALSWVNPPDTDLSHIEVLEGAANDLPAAAVISTVKGNAFVRA
GLGGLVTRYYWVRAVDLGGNVGNVNSNIGTGATTEQISHDDLADKLVSESKLAPFMAERI
TGIEKIAETVTSGLVRVNDSYGRIRSEIGRREADVAEVKADVRQVRDDTQSLASRVTTVA
AQFDGQIATVKEELTALVTADEATATRIDTVAAAWDGNLAGVQAKLTATANDTRTNAERI
DSVVAGYDKSLAGYDSRITANATATGALTTRLDVIGASVDGVKAGLTSEQTARADAVGAL
ASRIDSAFVAIKDASGSFQESVNLAVTEAKSAVNKVTLLSGTVGNHTSSIEQVSKVTDGL
SGQWTVKIDNNGAVSGFGLSSDPADESGVRSEFYVRADRFLIGITGPGGSIDHPFVIGRV
DGVPRISMSAAFIQDASIDSAKIRDATISSAHIQDLTIRGQKIEDFATSNMNAAQGAWDA
TVGLQTIGKRVLITAVRGWQIDIVTGYGGGESSSEIWSPSWVSVAYAWIEHPGPGYYTWR
TATSDAYGRNPRNFYCAISAVELRK