Protein Info for MPMX19_06680 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2185 PF13385: Laminin_G_3" amino acids 1166 to 1310 (145 residues), 56 bits, see alignment 2.7e-19 amino acids 1390 to 1522 (133 residues), 57.9 bits, see alignment 6.9e-20 amino acids 1627 to 1756 (130 residues), 38.8 bits, see alignment 5.3e-14 amino acids 1868 to 2006 (139 residues), 62.8 bits, see alignment 2.1e-21

Best Hits

Predicted SEED Role

"Phage tail fiber protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (2185 amino acids)

>MPMX19_06680 hypothetical protein (Azospirillum sp. SherDot2)
MAGWYRQGTVALTPGSAAVAGAGTMWMGVVRPGSAFTTDGRTLYEIREVANDRTLTLDRP
WEGETAAASAYAVIAASATLSNAELAGEIAAMVAKWAVREDQYDDWLGGSPNGGPNADGK
YPLTDSKGVTRLVESPARLLQLLDDGVVEHAAQIIAAIEDDVATARQAVTAATAAMTAVG
ADRQAVAQAAATVAAQTGESTTAAATATAQASIAVQRADEAADSAAAAAGLEASATAALA
AVETARDIVLEARTEAGNAATGALSARTAAEVARDTATVARDAAQQARDAAVTARTQAQD
WAVKTDAPVSGNLKSALSYALDAASQASVATGKATEASGSAAAAAASAAALDTAATAAQA
AAGNAATGAQTATAKAAAAAISADTARSAAQQAETAGTGSGTARTAAEAARDSAATAMTA
AQVAASQAGQSQTNAVNSAQTAATAAADAISAKSDATAARDLAVAARTEAQGARDLSQAF
AQGAVGYQPSPGVYSAFHWSEQAKGHAQTAATIVGGSNFGIVGDGASQRFAADNPGSLLN
LVQAPGGKLTFSPGNRAVSFGFDATTAPVSASGNITAGTVQGALEEIDHRLSTLSQDSIA
NGGGSVRVTEDGAVEIAPAAGRTATYKGGELHTSATAYGKAQTDAAIAAMISAGQAAGAA
RLTTPRTIALSGGATGTATAFDGTQNIAIPVTAVAASALTGTIDIARLPAGALERLYPVA
SDAERFALTTAQVQKGDTVQVGGTGGLMYLVVDESNLGNAAGYRAYTAARASAVDWSGVE
SKPALLTALASLDAGSGVLVQTGASTATKRAVGTAASTDIPDRAAADGRYAQIAANNVLS
GTVSVLNSASAEAIHVGNGAGTKFTFVGWNEAGGFGRIGAYGSSAWQNFAISEGGSPTAI
GTTAMPTGGAKLNVATGIQVDNKDVWHAGNLVPGNYAAVTSANTFNGKQTILGAGASLPA
NTGIASAISNTAGFEIQSQGTGTPAGAAFMSFHRPGNYAVHVGLDTDNELKIGGWSMGGV
AHKVWHAGNLPVTVSGNAVDFKSSPTVNGAPLATNTNTNTVAKSAVTVLPATGSLDVPAK
SILGVYSQFVGQAFNVDYNTEANYTQENAATGTDQVGGAFQLYNTAGAQIDSATKLLIHA
DGANGSTEIIDERGITPFGTHCGWFDGSSYFAVPPSYKLAFGSSQDFTYEIYARFDSLTS
NPIVWDTRPAGSSGNNPALIILSNGSVRIWINGTNRDTASGLIATNAFYHIAFVRRSGIA
AIYVNGVSALTWAESYTLPNSQIIIGQSAAIGSNTLTGWLDQFRVSKIARYSANFTPPTT
AFVTDADTVHLFSFDDGHGGQVLKDRSGSGREIQLTGSLSTAQAKFGTTSALLSGGYVIS
DKSKGHADLLSMGSDNFTLDVQAYLSSTSAPTQCLFVGNSGTYAPKIQYESGVLKIYLAS
GTASFDLANGVSFGSFSANSWHHVAITRSGTSVYCFIDGVLGATISVGTSSIWPVNNGAG
WAFGADFTGSNQWSGYVDEFRVKRGEAVWVSSFTPPTSAYSSDDRTVLLCHFEGANGDKV
TLDSSGSSYGTNAFGDTITPDLIFQGSAALSATQARGGHATSLALNGSSQYASIQFSPPS
AGHPVYFGVNAKFCIEGWFYFNSLGYDHGLFAIVDSSNTPLLRMYAAQTSGNLTVAVNGN
SFSGAAITSGWHHIALVRDARGWAICLDGTIGTYTIPHISVASNSNTQTLYLGAYNNAGS
IINNLAGAIDAVRITNGQPRYTANFTPATLVADDMTTLMWEFNGAVGQKWVKELSGNSAM
IAANGNARTVKDGVYLMPALSANGGPKSGTARARFGAGGVEFAYTGAGGAHRYDMRGARW
MTWIGGVDSTFTIDAWVYLTASSPNVIAQKYDSGNGNGVETWQLWINAGGNLPQFRWRDA
GGSTRTLTASTAIPLNTWKHVALTYTLLANAGAATAVFYIDGVRDTSLSDTMCRNDGDGG
FLSLFNDCNGTAPFCGTLDEIRMSNTMRWASSFTPPTIPYGQQHVTGPFYVATLDSSRID
VSDWSTIHSATITQTTPPGTSIKWLVSFDGRTTWRKWDGAAWVVVPLNSGASIDTNGNDY
LTLQNALKNLNVESYGTIDFAFSLKTANPNFSPSVDAVTLARDEYELGAAKIDYTIKRNG
AAGAEIHRITNLKPYPVNVVYDYVA